RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 BIN2Q9UBW5 565 aaPredicted RBP21.85■■□□□ 1.09
FOXN3-214ENST00000557258 TTF2Q9UNY4 1162 aaKnown RBP21.85■■□□□ 1.09
FOXN3-214ENST00000557258 UBR3Q6ZT12 1888 aa21.85■■□□□ 1.09
FOXN3-214ENST00000557258 NAV1Q8NEY1 1877 aa21.85■■□□□ 1.09
FOXN3-214ENST00000557258 FAM196BA6NMK8 535 aa21.84■■□□□ 1.09
FOXN3-214ENST00000557258 STAT6P42226 847 aa21.84■■□□□ 1.09
FOXN3-214ENST00000557258 DHX8Q14562 1220 aaKnown RBP21.84■■□□□ 1.09
FOXN3-214ENST00000557258 JAKMIP3Q5VZ66 844 aa21.84■■□□□ 1.09
FOXN3-214ENST00000557258 SPECC1LQ69YQ0 1117 aa21.84■■□□□ 1.09
FOXN3-214ENST00000557258 TRIML1Q8N9V2 468 aa21.84■■□□□ 1.09
FOXN3-214ENST00000557258 MTF1Q14872 753 aa21.84■■□□□ 1.09
FOXN3-214ENST00000557258 DPP8Q6V1X1 898 aaPredicted RBP21.84■■□□□ 1.09
FOXN3-214ENST00000557258 LRRC15Q8TF66 581 aa21.84■■□□□ 1.09
FOXN3-214ENST00000557258 M0R2N6 131 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 CCNT1O60563 726 aaKnown RBP21.83■■□□□ 1.09
FOXN3-214ENST00000557258 AKR1B1P15121 316 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 SHROOM1Q2M3G4 852 aaPredicted RBP21.83■■□□□ 1.09
FOXN3-214ENST00000557258 PPP4R3BQ5MIZ7 849 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 TOGARAM2Q6ZUX3 1019 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 KIF18AQ8NI77 898 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 GPCPD1Q9NPB8 672 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 SMCO2A6NFE2 343 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 NRDCO43847 1150 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 DTHD1Q6ZMT9 781 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 C15orf52Q6ZUT6 534 aaKnown RBP21.83■■□□□ 1.09
FOXN3-214ENST00000557258 TC2NQ8N9U0 490 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 ANKS1AQ92625 1134 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 COA7Q96BR5 231 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 CCDC34Q96HJ3 373 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 DBNDD1Q9H9R9 158 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 DNAI1Q9UI46 699 aa21.83■■□□□ 1.09
FOXN3-214ENST00000557258 TRIM49BA6NDI0 452 aa21.83■■□□□ 1.08
FOXN3-214ENST00000557258 SPDYE4A6NLX3 237 aa21.83■■□□□ 1.08
FOXN3-214ENST00000557258 FANCGO15287 622 aa21.83■■□□□ 1.08
FOXN3-214ENST00000557258 TRAPPC10P48553 1259 aa21.83■■□□□ 1.08
FOXN3-214ENST00000557258 TMEM139Q8IV31 216 aa21.83■■□□□ 1.08
FOXN3-214ENST00000557258 DDX60LQ5H9U9 1706 aaKnown RBP21.82■■□□□ 1.08
FOXN3-214ENST00000557258 GNAQP50148 359 aa21.82■■□□□ 1.08
FOXN3-214ENST00000557258 PDCL2Q8N4E4 241 aa21.82■■□□□ 1.08
FOXN3-214ENST00000557258 NEDD1Q8NHV4 660 aa21.82■■□□□ 1.08
FOXN3-214ENST00000557258 GSDMAQ96QA5 445 aa21.82■■□□□ 1.08
FOXN3-214ENST00000557258 BAG1Q99933 345 aaPredicted RBP21.82■■□□□ 1.08
FOXN3-214ENST00000557258 ZC3H12CQ9C0D7 883 aaKnown RBP21.82■■□□□ 1.08
FOXN3-214ENST00000557258 SPATA1Q5VX52 437 aa21.82■■□□□ 1.08
FOXN3-214ENST00000557258 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
FOXN3-214ENST00000557258 TCP11L1Q9NUJ3 509 aa21.82■■□□□ 1.08
FOXN3-214ENST00000557258 MPHOSPH10O00566 681 aaKnown RBP21.81■■□□□ 1.08
FOXN3-214ENST00000557258 ERCC5P28715 1186 aaPredicted RBP21.81■■□□□ 1.08
FOXN3-214ENST00000557258 HOXA10P31260 410 aaPredicted RBP21.81■■□□□ 1.08
FOXN3-214ENST00000557258 NAALADL2Q58DX5 795 aa21.81■■□□□ 1.08
FOXN3-214ENST00000557258 APTXQ7Z2E3 356 aaKnown RBP21.81■■□□□ 1.08
FOXN3-214ENST00000557258 PODXL2Q9NZ53 605 aa21.81■■□□□ 1.08
FOXN3-214ENST00000557258 TCP10Q12799 353 aa21.81■■□□□ 1.08
FOXN3-214ENST00000557258 NFIAQ12857 509 aa21.81■■□□□ 1.08
FOXN3-214ENST00000557258 NR1I3Q14994 352 aa21.81■■□□□ 1.08
FOXN3-214ENST00000557258 VPS16Q9H269 839 aa21.81■■□□□ 1.08
FOXN3-214ENST00000557258 ZNF287Q9HBT7 754 aa21.81■■□□□ 1.08
FOXN3-214ENST00000557258 A0A0U1RQJ8 604 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 G3V3G9 751 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 SLC27A3Q5K4L6 730 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 DCAF8Q5TAQ9 597 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 ZFPM1Q8IX07 1006 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 CCDC148Q8NFR7 591 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 ATRIPQ8WXE1 791 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 ZNF622Q969S3 477 aaKnown RBP eCLIP21.8■■□□□ 1.08
FOXN3-214ENST00000557258 DISC1Q9NRI5 854 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 SEC63Q9UGP8 760 aaKnown RBP21.8■■□□□ 1.08
FOXN3-214ENST00000557258 RPN1P04843 607 aaKnown RBP21.8■■□□□ 1.08
FOXN3-214ENST00000557258 SLC16A2P36021 539 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 UBA7P41226 1012 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 TBX2Q13207 712 aaPredicted RBP21.8■■□□□ 1.08
FOXN3-214ENST00000557258 RRP36Q96EU6 259 aaKnown RBP21.8■■□□□ 1.08
FOXN3-214ENST00000557258 SH3GLB2Q9NR46 395 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 USP40Q9NVE5 1235 aa21.8■■□□□ 1.08
FOXN3-214ENST00000557258 SOWAHDA6NJG2 315 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 PLCG2P16885 1265 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 TXLNAP40222 546 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 TECP42680 631 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 RBL2Q08999 1139 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 CRAMP1Q96RY5 1269 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 GAKO14976 1311 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 CDK5RAP2Q96SN8 1893 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 MMP10P09238 476 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 IGSF22Q8N9C0 903 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 NELFBQ8WX92 580 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 GJA10Q969M2 543 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 TAB2Q9NYJ8 693 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 ATP6V0A2Q9Y487 856 aa21.79■■□□□ 1.08
FOXN3-214ENST00000557258 A0A1B0GTH6 734 aa21.78■■□□□ 1.08
FOXN3-214ENST00000557258 PSDA5PKW4 1024 aaPredicted RBP21.78■■□□□ 1.08
FOXN3-214ENST00000557258 SRGNP10124 158 aa21.78■■□□□ 1.08
FOXN3-214ENST00000557258 PDHBP11177 359 aa21.78■■□□□ 1.08
FOXN3-214ENST00000557258 LONP1P36776 959 aaKnown RBP21.78■■□□□ 1.08
FOXN3-214ENST00000557258 PRCPP42785 496 aa21.78■■□□□ 1.08
FOXN3-214ENST00000557258 ELF2Q15723 593 aa21.78■■□□□ 1.08
FOXN3-214ENST00000557258 TTBK2Q6IQ55 1244 aa21.78■■□□□ 1.08
FOXN3-214ENST00000557258 KIAA0825Q8IV33 1275 aa21.78■■□□□ 1.08
FOXN3-214ENST00000557258 TBCKQ8TEA7 893 aa21.78■■□□□ 1.08
FOXN3-214ENST00000557258 TBC1D22AQ8WUA7 517 aa21.78■■□□□ 1.08
FOXN3-214ENST00000557258 ANKRD7Q92527 254 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms