RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 ATG4CQ96DT6 458 aa15.32■□□□□ 0.04
PSEN1-219ENST00000556951 RIOK1Q9BRS2 568 aaKnown RBP15.32■□□□□ 0.04
PSEN1-219ENST00000556951 NKX2-4Q9H2Z4 354 aa15.32■□□□□ 0.04
PSEN1-219ENST00000556951 MROH8Q9H579 483 aa15.32■□□□□ 0.04
PSEN1-219ENST00000556951 ANTXR1Q9H6X2 564 aa15.32■□□□□ 0.04
PSEN1-219ENST00000556951 XPNPEP3Q9NQH7 507 aa15.32■□□□□ 0.04
PSEN1-219ENST00000556951 TLR7Q9NYK1 1049 aaKnown RBP15.32■□□□□ 0.04
PSEN1-219ENST00000556951 NRBP1Q9UHY1 535 aa15.32■□□□□ 0.04
PSEN1-219ENST00000556951 DBNLQ9UJU6 430 aaKnown RBP15.32■□□□□ 0.04
PSEN1-219ENST00000556951 ZNFX1Q9P2E3 1918 aaKnown RBP15.32■□□□□ 0.04
PSEN1-219ENST00000556951 TRIOO75962 3097 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 A0A1W2PQ45 241 aaPredicted RBP15.31■□□□□ 0.04
PSEN1-219ENST00000556951 A0A1W2PQY0 241 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 ADAMTS4O75173 837 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 HMMRO75330 724 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 IDH1O75874 414 aaKnown RBP15.31■□□□□ 0.04
PSEN1-219ENST00000556951 RGS20O76081 388 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 ZNF865P0CJ78 1059 aaPredicted RBP15.31■□□□□ 0.04
PSEN1-219ENST00000556951 POU3F3P20264 500 aaPredicted RBP15.31■□□□□ 0.04
PSEN1-219ENST00000556951 ANKRD33Q7Z3H0 272 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 GJD3Q8N144 294 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 MAGEB6Q8N7X4 407 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 SSH3Q8TE77 659 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 ANKS1AQ92625 1134 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 HLA-CQ95604 372 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 TOX2Q96NM4 488 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 TMEM39AQ9NV64 488 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 ADAMTS5Q9UNA0 930 aa15.31■□□□□ 0.04
PSEN1-219ENST00000556951 PQBP1O60828 265 aaKnown RBP15.3■□□□□ 0.04
PSEN1-219ENST00000556951 ATP8B2P98198 1209 aa15.3■□□□□ 0.04
PSEN1-219ENST00000556951 ZNF792Q3KQV3 632 aa15.3■□□□□ 0.04
PSEN1-219ENST00000556951 TMEM240Q5SV17 173 aa15.3■□□□□ 0.04
PSEN1-219ENST00000556951 CCSAPQ6IQ19 270 aaPredicted RBP15.3■□□□□ 0.04
PSEN1-219ENST00000556951 NCAPG2Q86XI2 1143 aa15.3■□□□□ 0.04
PSEN1-219ENST00000556951 MB21D1Q8N884 522 aa15.3■□□□□ 0.04
PSEN1-219ENST00000556951 EAF2Q96CJ1 260 aaPredicted RBP15.3■□□□□ 0.04
PSEN1-219ENST00000556951 CCDC8Q9H0W5 538 aaPredicted RBP15.3■□□□□ 0.04
PSEN1-219ENST00000556951 SLC5A4Q9NY91 659 aa15.3■□□□□ 0.04
PSEN1-219ENST00000556951 MTCH2Q9Y6C9 303 aa15.3■□□□□ 0.04
PSEN1-219ENST00000556951 TIMP1P01033 207 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 PGK2P07205 417 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 RARBP10826 455 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 FCER1AP12319 257 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 PLS1Q14651 629 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 TMEM132BQ14DG7 1078 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 RNF180Q86T96 592 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 CERS3Q8IU89 383 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 KLHDC9Q8NEP7 349 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 PRSS33Q8NF86 280 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 LENG1Q96BZ8 264 aaPredicted RBP15.29■□□□□ 0.04
PSEN1-219ENST00000556951 TINF2Q9BSI4 451 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 TANGO6Q9C0B7 1094 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 DCTPP1Q9H773 170 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 TBX21Q9UL17 535 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 YBX2Q9Y2T7 364 aaKnown RBP15.29■□□□□ 0.04
PSEN1-219ENST00000556951 PTPRZ1P23471 2315 aaPredicted RBP15.29■□□□□ 0.04
PSEN1-219ENST00000556951 CHD8Q9HCK8 2581 aa15.29■□□□□ 0.04
PSEN1-219ENST00000556951 CDK7P50613 346 aa15.28■□□□□ 0.04
PSEN1-219ENST00000556951 PTPN5P54829 565 aa15.28■□□□□ 0.04
PSEN1-219ENST00000556951 IRX5P78411 483 aaPredicted RBP15.28■□□□□ 0.04
PSEN1-219ENST00000556951 CLEC10AQ8IUN9 316 aa15.28■□□□□ 0.04
PSEN1-219ENST00000556951 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
PSEN1-219ENST00000556951 TSEN34Q9BSV6 310 aaKnown RBP15.28■□□□□ 0.04
PSEN1-219ENST00000556951 DIS3Q9Y2L1 958 aaKnown RBP15.28■□□□□ 0.04
PSEN1-219ENST00000556951 NOP58Q9Y2X3 529 aaKnown RBP15.28■□□□□ 0.04
PSEN1-219ENST00000556951 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
PSEN1-219ENST00000556951 BRWD1Q9NSI6 2320 aa15.28■□□□□ 0.04
PSEN1-219ENST00000556951 SURF6O75683 361 aaKnown RBP15.27■□□□□ 0.04
PSEN1-219ENST00000556951 POLR3DP05423 398 aaPredicted RBP15.27■□□□□ 0.04
PSEN1-219ENST00000556951 ACLYP53396 1101 aa15.27■□□□□ 0.04
PSEN1-219ENST00000556951 MFSD5Q6N075 450 aa15.27■□□□□ 0.04
PSEN1-219ENST00000556951 CCDC174Q6PII3 467 aa15.27■□□□□ 0.04
PSEN1-219ENST00000556951 HFE2Q6ZVN8 426 aa15.27■□□□□ 0.04
PSEN1-219ENST00000556951 RIOX2Q8IUF8 465 aa15.27■□□□□ 0.04
PSEN1-219ENST00000556951 FAM178BQ8IXR5 827 aa15.27■□□□□ 0.04
PSEN1-219ENST00000556951 ROBO3Q96MS0 1386 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 POTEB3A0JP26 581 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 DCDC2CA8MYV0 355 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
PSEN1-219ENST00000556951 GTPBP6O43824 516 aaPredicted RBP15.26■□□□□ 0.03
PSEN1-219ENST00000556951 FLOT1O75955 427 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 SLC25A27O95847 323 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 SNAI1O95863 264 aaPredicted RBP15.26■□□□□ 0.03
PSEN1-219ENST00000556951 CYP2D6P10635 497 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 NUCB1Q02818 461 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 KCNA10Q16322 511 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 POTEBQ6S5H4 581 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 SPICE1Q8N0Z3 855 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 REPS2Q8NFH8 660 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 COL26A1Q96A83 441 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 DYNLL2Q96FJ2 89 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 MFSD14AQ96MC6 490 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 VCPKMTQ9H867 229 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 FBXO28Q9NVF7 368 aa15.26■□□□□ 0.03
PSEN1-219ENST00000556951 MYADML2A6NDP7 307 aa15.25■□□□□ 0.03
PSEN1-219ENST00000556951 DCXO43602 365 aa15.25■□□□□ 0.03
PSEN1-219ENST00000556951 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
PSEN1-219ENST00000556951 ZNF365Q70YC5 407 aa15.25■□□□□ 0.03
PSEN1-219ENST00000556951 MMP19Q99542 508 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms