RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 ORC1Q13415 861 aa7.49□□□□□ -1.21
TMEM260-212ENST00000556810 HDAC1Q13547 482 aaPredicted RBP7.49□□□□□ -1.21
TMEM260-212ENST00000556810 ZNF423Q2M1K9 1284 aa7.49□□□□□ -1.21
TMEM260-212ENST00000556810 TOM1L2Q6ZVM7 507 aa7.49□□□□□ -1.21
TMEM260-212ENST00000556810 IL17REQ8NFR9 667 aa7.49□□□□□ -1.21
TMEM260-212ENST00000556810 MFSD14AQ96MC6 490 aa7.49□□□□□ -1.21
TMEM260-212ENST00000556810 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
TMEM260-212ENST00000556810 THRAP3Q9Y2W1 955 aaKnown RBP7.49□□□□□ -1.21
TMEM260-212ENST00000556810 SBF2Q86WG5 1849 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 CPNE3O75131 537 aaKnown RBP7.48□□□□□ -1.21
TMEM260-212ENST00000556810 USP11P51784 963 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 INTS3Q68E01 1043 aaKnown RBP7.48□□□□□ -1.21
TMEM260-212ENST00000556810 PTF1AQ7RTS3 328 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 RPAP2Q8IXW5 612 aaPredicted RBP7.48□□□□□ -1.21
TMEM260-212ENST00000556810 TMEM57Q8N5G2 664 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 USHBP1Q8N6Y0 703 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 TSPYL6Q8N831 410 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 GIMAP7Q8NHV1 300 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 GCC1Q96CN9 775 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 CITED4Q96RK1 184 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 KDM3BQ7LBC6 1761 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 ABCC4O15439 1325 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 KDM2BQ8NHM5 1336 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 PCDH11XQ9BZA7 1347 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 PCDH11YQ9BZA8 1340 aa7.48□□□□□ -1.21
TMEM260-212ENST00000556810 PKD1L3Q7Z443 1732 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 FAM95CA0A1B0GW59 222 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
TMEM260-212ENST00000556810 PLSCR1O15162 318 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 HMMRO75330 724 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 DDX58O95786 925 aaKnown RBP7.47□□□□□ -1.21
TMEM260-212ENST00000556810 CYP11A1P05108 521 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 GNAI3P08754 354 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 IL2RBP14784 551 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 MAOBP27338 520 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 SOX4Q06945 474 aaPredicted RBP7.47□□□□□ -1.21
TMEM260-212ENST00000556810 POU4F3Q15319 338 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 MCTP1Q6DN14 999 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 CDPF1Q6NVV7 123 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 PAOXQ6QHF9 649 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 DTX1Q86Y01 620 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 TTC5Q8N0Z6 440 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 C2CD4AQ8NCU7 369 aaPredicted RBP7.47□□□□□ -1.21
TMEM260-212ENST00000556810 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
TMEM260-212ENST00000556810 PDGFDQ9GZP0 370 aaPredicted RBP7.47□□□□□ -1.21
TMEM260-212ENST00000556810 EHD4Q9H223 541 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 NPHS2Q9NP85 383 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 ZBTB40Q9NUA8 1239 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 DBF4Q9UBU7 674 aaPredicted RBP7.47□□□□□ -1.21
TMEM260-212ENST00000556810 IVNS1ABPQ9Y6Y0 642 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 ADAMTS7Q9UKP4 1686 aa7.47□□□□□ -1.21
TMEM260-212ENST00000556810 SIPA1L3O60292 1781 aaPredicted RBP7.46□□□□□ -1.21
TMEM260-212ENST00000556810 ERVV-2B6SEH9 535 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 CTSBP07858 339 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 ADH5P11766 374 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 PHKG2P15735 406 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 GP2P55259 537 aaKnown RBP7.46□□□□□ -1.22
TMEM260-212ENST00000556810 EIF4A1P60842 406 aaKnown RBP7.46□□□□□ -1.22
TMEM260-212ENST00000556810 NFKBIBQ15653 356 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 HP1BP3Q5SSJ5 553 aaPredicted RBP7.46□□□□□ -1.22
TMEM260-212ENST00000556810 MPRIPQ6WCQ1 1025 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 FBXL6Q8N531 539 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
TMEM260-212ENST00000556810 FBLIM1Q8WUP2 373 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 YIPF2Q9BWQ6 316 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 ZNF576Q9H609 170 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 SLC52A2Q9HAB3 445 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 ATG3Q9NT62 314 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 HYPKQ9NX55 129 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 PIM2Q9P1W9 311 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 OAS3Q9Y6K5 1087 aaKnown RBP7.46□□□□□ -1.22
TMEM260-212ENST00000556810 UTRNP46939 3433 aa7.46□□□□□ -1.22
TMEM260-212ENST00000556810 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 ADAMTS4O75173 837 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 ZBTB7AO95365 584 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 B3GALT4O96024 378 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 F13BP05160 661 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 RLBP1P12271 317 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 ITPKAP23677 461 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 DDB1Q16531 1140 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 TRIM56Q9BRZ2 755 aaKnown RBP7.45□□□□□ -1.22
TMEM260-212ENST00000556810 ZFYVE1Q9HBF4 777 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 LGR6Q9HBX8 967 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 MIS18AQ9NYP9 233 aa7.45□□□□□ -1.22
TMEM260-212ENST00000556810 GNEQ9Y223 722 aaKnown RBP7.45□□□□□ -1.22
TMEM260-212ENST00000556810 PXDNLA1KZ92 1463 aa7.44□□□□□ -1.22
TMEM260-212ENST00000556810 COL5A2P05997 1499 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-212ENST00000556810 CASZ1Q86V15 1759 aa7.44□□□□□ -1.22
TMEM260-212ENST00000556810 EIF1AYO14602 144 aaKnown RBP7.44□□□□□ -1.22
TMEM260-212ENST00000556810 GPR182O15218 404 aa7.44□□□□□ -1.22
TMEM260-212ENST00000556810 IGHA2P01877 340 aa7.44□□□□□ -1.22
TMEM260-212ENST00000556810 ANP32AP39687 249 aaKnown RBP7.44□□□□□ -1.22
TMEM260-212ENST00000556810 IRAK1P51617 712 aa7.44□□□□□ -1.22
TMEM260-212ENST00000556810 ZNF790Q6PG37 636 aa7.44□□□□□ -1.22
TMEM260-212ENST00000556810 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
TMEM260-212ENST00000556810 MARCH10Q8NA82 808 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-212ENST00000556810 EZH1Q92800 747 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-212ENST00000556810 CCDC74AQ96AQ1 378 aa7.44□□□□□ -1.22
TMEM260-212ENST00000556810 FMNL2Q96PY5 1086 aa7.44□□□□□ -1.22
TMEM260-212ENST00000556810 CORO1BQ9BR76 489 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms