RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 NYAP2Q9P242 653 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 CLIP2Q9UDT6 1046 aa8.7□□□□□ -1.02
SCFD1-222ENST00000556768 F5H6K3 240 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 PRDM1O75626 825 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 FCER1AP12319 257 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 RASA1P20936 1047 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 COPB2P35606 906 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 KLRC3Q07444 240 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 PPARAQ07869 468 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 MCMDC2Q4G0Z9 681 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 MORN1Q5T089 497 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 TMEM92Q6UXU6 159 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 NECAB2Q7Z6G3 386 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 SIAH1Q8IUQ4 282 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 SMC5Q8IY18 1101 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 KCTD17Q8N5Z5 321 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 ANKLE1Q8NAG6 615 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 SHCBP1Q8NEM2 672 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 EXOC6Q8TAG9 804 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
SCFD1-222ENST00000556768 CDHR5Q9HBB8 845 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 BTBD7Q9P203 1132 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 ISY1Q9ULR0 285 aaKnown RBP8.69□□□□□ -1.02
SCFD1-222ENST00000556768 SYNPO2Q9UMS6 1093 aa8.69□□□□□ -1.02
SCFD1-222ENST00000556768 TSPY2A6NKD2 308 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 SMIM22K7EJ46 135 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 ERCC3P19447 782 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 TFAP4Q01664 338 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 NUCB1Q02818 461 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 CLEC10AQ8IUN9 316 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 PRPF38AQ8NAV1 312 aaKnown RBP8.68□□□□□ -1.02
SCFD1-222ENST00000556768 TRIB2Q92519 343 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 MOV10L1Q9BXT6 1211 aaKnown RBP8.68□□□□□ -1.02
SCFD1-222ENST00000556768 TOMM22Q9NS69 142 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 RANBP2P49792 3224 aaKnown RBP8.68□□□□□ -1.02
SCFD1-222ENST00000556768 HIP1O00291 1037 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 MSCO60682 206 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 ZBED4O75132 1171 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 CNMDO75829 334 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 HOXC6P09630 235 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 ADORA2AP29274 412 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 CNGA1P29973 690 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 STAT3P40763 770 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 GRB14Q14449 540 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 KCTD2Q14681 263 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 FAM83BQ5T0W9 1011 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 ABRAQ8N0Z2 381 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 USP6NLQ92738 828 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 SHISA4Q96DD7 197 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 ATG4CQ96DT6 458 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 SLF1Q9BQI6 1058 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 NBPF3Q9H094 633 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 EPB41L4AQ9HCS5 686 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-222ENST00000556768 MTMR4Q9NYA4 1195 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 PPP1R9AQ9ULJ8 1098 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 STX8Q9UNK0 236 aa8.68□□□□□ -1.02
SCFD1-222ENST00000556768 SALL3Q9BXA9 1300 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 VWA5AO00534 786 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 RANBP6O60518 1105 aaKnown RBP8.67□□□□□ -1.02
SCFD1-222ENST00000556768 FDX1P10109 184 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 CACNB2Q08289 660 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-222ENST00000556768 IKQ13123 557 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-222ENST00000556768 KIAA1755Q5JYT7 1200 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 MAP3K21Q5TCX8 1036 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 POTEEQ6S8J3 1075 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 NEDD1Q8NHV4 660 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 MKL1Q969V6 931 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 CEP95Q96GE4 821 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 PAWRQ96IZ0 340 aaKnown RBP8.67□□□□□ -1.02
SCFD1-222ENST00000556768 DIAPH3Q9NSV4 1193 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-222ENST00000556768 POLR3EQ9NVU0 708 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 FEM1BQ9UK73 627 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 ROBO3Q96MS0 1386 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 DNAH12Q6ZR08 3092 aa8.67□□□□□ -1.02
SCFD1-222ENST00000556768 NDUFB10O96000 172 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 IGHDP01880 384 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 TRIM32Q13049 653 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 TMEM132BQ14DG7 1078 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 ALX1Q15699 326 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 CCL14Q16627 93 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 FAM47AQ5JRC9 791 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 CCDC129Q6ZRS4 1044 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 CHURC1Q8WUH1 139 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 KIFC2Q96AC6 838 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 MMP19Q99542 508 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 TEX13BQ9BXU2 312 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 OSBPL3Q9H4L5 887 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 GALR2O43603 387 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-222ENST00000556768 FGAP02671 866 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 PCP11498 1178 aaKnown RBP8.66□□□□□ -1.02
SCFD1-222ENST00000556768 BMP3P12645 472 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 SLC1A4P43007 532 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 SLC4A3P48751 1232 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 OLFML2BQ68BL8 750 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 SLFN13Q68D06 897 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 RIOX2Q8IUF8 465 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 PLEKHM2Q8IWE5 1019 aa8.66□□□□□ -1.02
SCFD1-222ENST00000556768 GMCL1P1Q8NEA9 526 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms