RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ZNF713Q8N859 430 aaPredicted RBP13.09□□□□□ -0.31
FOXN3-212ENST00000556541 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
FOXN3-212ENST00000556541 JMYQ8N9B5 988 aa13.09□□□□□ -0.31
FOXN3-212ENST00000556541 PRPF38AQ8NAV1 312 aaKnown RBP13.09□□□□□ -0.31
FOXN3-212ENST00000556541 SMARCC2Q8TAQ2 1214 aa13.09□□□□□ -0.31
FOXN3-212ENST00000556541 BRI3BPQ8WY22 251 aa13.09□□□□□ -0.31
FOXN3-212ENST00000556541 MYL10Q9BUA6 226 aa13.09□□□□□ -0.31
FOXN3-212ENST00000556541 RPAP3Q9H6T3 665 aaPredicted RBP13.09□□□□□ -0.31
FOXN3-212ENST00000556541 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
FOXN3-212ENST00000556541 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
FOXN3-212ENST00000556541 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
FOXN3-212ENST00000556541 CNTNAP5Q8WYK1 1306 aa13.09□□□□□ -0.31
FOXN3-212ENST00000556541 TMEM232C9JQI7 657 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 ATP2A1O14983 1001 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 PRPF3O43395 683 aaKnown RBP13.08□□□□□ -0.32
FOXN3-212ENST00000556541 DSG3P32926 999 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 OAZ1P54368 228 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 ST3GAL1Q11201 340 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 COG2Q14746 738 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 CCDC96Q2M329 555 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 SYDE2Q5VT97 1194 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 OTUD7BQ6GQQ9 843 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 STAG2Q8N3U4 1231 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 CAPNS2Q96L46 248 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 SLF1Q9BQI6 1058 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 CFHR5Q9BXR6 569 aa13.08□□□□□ -0.32
FOXN3-212ENST00000556541 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
FOXN3-212ENST00000556541 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.08□□□□□ -0.32
FOXN3-212ENST00000556541 CPLX1O14810 134 aa13.07□□□□□ -0.32
FOXN3-212ENST00000556541 FMNL1O95466 1100 aaPredicted RBP13.07□□□□□ -0.32
FOXN3-212ENST00000556541 ALDH1A1P00352 501 aa13.07□□□□□ -0.32
FOXN3-212ENST00000556541 PDIA4P13667 645 aaKnown RBP13.07□□□□□ -0.32
FOXN3-212ENST00000556541 OSBPP22059 807 aa13.07□□□□□ -0.32
FOXN3-212ENST00000556541 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
FOXN3-212ENST00000556541 ZYXQ15942 572 aaKnown RBP13.07□□□□□ -0.32
FOXN3-212ENST00000556541 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
FOXN3-212ENST00000556541 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
FOXN3-212ENST00000556541 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
FOXN3-212ENST00000556541 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
FOXN3-212ENST00000556541 SPICE1Q8N0Z3 855 aa13.07□□□□□ -0.32
FOXN3-212ENST00000556541 SRBD1Q8N5C6 995 aaKnown RBP13.07□□□□□ -0.32
FOXN3-212ENST00000556541 NSUN7Q8NE18 718 aaKnown RBP13.07□□□□□ -0.32
FOXN3-212ENST00000556541 KIF3AQ9Y496 699 aa13.07□□□□□ -0.32
FOXN3-212ENST00000556541 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
FOXN3-212ENST00000556541 RBBP6Q7Z6E9 1792 aaKnown RBP13.07□□□□□ -0.32
FOXN3-212ENST00000556541 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-212ENST00000556541 BTBD19C9JJ37 291 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 CYTH3O43739 400 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 FLOT1O75955 427 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 PLEKHA8P1O95397 391 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 DEXIO95424 95 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 CTDNEP1O95476 244 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 RXRAP19793 462 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 GCLCP48506 637 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-212ENST00000556541 CCT2P78371 535 aaKnown RBP13.06□□□□□ -0.32
FOXN3-212ENST00000556541 SLC35G1Q2M3R5 365 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
FOXN3-212ENST00000556541 RASGRP2Q7LDG7 609 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 ADGRF4Q8IZF3 695 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 WASF1Q92558 559 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 PARK7Q99497 189 aaKnown RBP13.06□□□□□ -0.32
FOXN3-212ENST00000556541 NUP88Q99567 741 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-212ENST00000556541 TANGO6Q9C0B7 1094 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 JMJD4Q9H9V9 463 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 SLC38A10Q9HBR0 1119 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 PRR12Q9ULL5 1215 aa13.06□□□□□ -0.32
FOXN3-212ENST00000556541 NAP1L2Q9ULW6 460 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-212ENST00000556541 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
FOXN3-212ENST00000556541 ZBTB5O15062 677 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 SLC34A2O95436 690 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 COPB2P35606 906 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 IRX3P78415 501 aaPredicted RBP13.05□□□□□ -0.32
FOXN3-212ENST00000556541 STK3Q13188 491 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 TTBK2Q6IQ55 1244 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 CYP4F22Q6NT55 531 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 NECAB1Q8N987 351 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 REPS2Q8NFH8 660 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 RRP36Q96EU6 259 aaKnown RBP13.05□□□□□ -0.32
FOXN3-212ENST00000556541 PTPN18Q99952 460 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 LARP6Q9BRS8 491 aaKnown RBP13.05□□□□□ -0.32
FOXN3-212ENST00000556541 ASCC2Q9H1I8 757 aaPredicted RBP13.05□□□□□ -0.32
FOXN3-212ENST00000556541 NCOA5Q9HCD5 579 aaKnown RBP13.05□□□□□ -0.32
FOXN3-212ENST00000556541 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 SH3GLB2Q9NR46 395 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 RABGAP1Q9Y3P9 1069 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
FOXN3-212ENST00000556541 ADGRA2Q96PE1 1338 aa13.05□□□□□ -0.32
FOXN3-212ENST00000556541 PNMA6FA0A0J9YX94 578 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 PTPDC1A2A3K4 754 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 PDHXO00330 501 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 VWA5AO00534 786 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 RAD21O60216 631 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 HERVK_113P62684 666 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 KIF23Q02241 960 aaPredicted RBP13.04□□□□□ -0.32
FOXN3-212ENST00000556541 SSRP1Q08945 709 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms