RNA–Protein interactions for RNA: ENST00000556530.1

PNN-205, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2 BASIC

Gene PNN, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-205ENST00000556530 NAP1L2Q9ULW6 460 aaPredicted RBP23.12■■□□□ 1.29
PNN-205ENST00000556530 CYP46A1Q9Y6A2 500 aa23.12■■□□□ 1.29
PNN-205ENST00000556530 SNHG28P0DPA3 235 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 LIFRP42702 1097 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 PSMC4P43686 418 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 RUFY3Q7L099 469 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 MB21D1Q8N884 522 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 UPF3BQ9BZI7 483 aaKnown RBP23.11■■□□□ 1.29
PNN-205ENST00000556530 UBA5Q9GZZ9 404 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 CPVLQ9H3G5 476 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 CWC22Q9HCG8 908 aaKnown RBP23.11■■□□□ 1.29
PNN-205ENST00000556530 ZSWIM6Q9HCJ5 1215 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 PRR12Q9ULL5 1215 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 SLC12A7Q9Y666 1083 aa23.11■■□□□ 1.29
PNN-205ENST00000556530 COL11A1P12107 1806 aaPredicted RBP23.1■■□□□ 1.29
PNN-205ENST00000556530 ANAPC15P60006 121 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 TMEM132BQ14DG7 1078 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 ASPRV1Q53RT3 343 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 GPATCH4Q5T3I0 446 aaKnown RBP23.1■■□□□ 1.29
PNN-205ENST00000556530 SYDE2Q5VT97 1194 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 WDR78Q5VTH9 848 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 SYNE3Q6ZMZ3 975 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 CPXCR1Q8N123 301 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 TM6SF1Q9BZW5 370 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 ADAMTS5Q9UNA0 930 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 ZSWIM8A7E2V4 1837 aa23.1■■□□□ 1.29
PNN-205ENST00000556530 DHX16O60231 1041 aaKnown RBP23.09■■□□□ 1.29
PNN-205ENST00000556530 PLA2G6O60733 806 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 RXRAP19793 462 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 CTGFP29279 349 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 FCGRTP55899 365 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 CCNA1P78396 465 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 CAP1Q01518 475 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 GRM4Q14833 912 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 CCDC174Q6PII3 467 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 CCDC144CPQ8IYA2 1237 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 STAG2Q8N3U4 1231 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 C22orf23Q9BZE7 217 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 SPATC1LQ9H0A9 340 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 EFCC1Q9HA90 598 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 UPF2Q9HAU5 1272 aaKnown RBP23.09■■□□□ 1.29
PNN-205ENST00000556530 RAVER2Q9HCJ3 691 aaKnown RBP23.09■■□□□ 1.29
PNN-205ENST00000556530 TRIM17Q9Y577 477 aa23.09■■□□□ 1.29
PNN-205ENST00000556530 TROAPQ12815 778 aa23.08■■□□□ 1.29
PNN-205ENST00000556530 ARHGEF6Q15052 776 aa23.08■■□□□ 1.29
PNN-205ENST00000556530 BTNL9Q6UXG8 535 aa23.08■■□□□ 1.29
PNN-205ENST00000556530 BRF1Q92994 677 aa23.08■■□□□ 1.29
PNN-205ENST00000556530 TRIM47Q96LD4 638 aa23.08■■□□□ 1.29
PNN-205ENST00000556530 PORCNQ9H237 461 aa23.08■■□□□ 1.29
PNN-205ENST00000556530 VAT1LQ9HCJ6 419 aa23.08■■□□□ 1.29
PNN-205ENST00000556530 PDRG1Q9NUG6 133 aa23.08■■□□□ 1.29
PNN-205ENST00000556530 MGAMO43451 1857 aa23.08■■□□□ 1.29
PNN-205ENST00000556530 KLF18A0A0U1RQI7 1052 aa23.07■■□□□ 1.28
PNN-205ENST00000556530 KLRF2D3W0D1 207 aa23.07■■□□□ 1.28
PNN-205ENST00000556530 TNPO2O14787 897 aaKnown RBP23.07■■□□□ 1.28
PNN-205ENST00000556530 DDAH1O94760 285 aa23.07■■□□□ 1.28
PNN-205ENST00000556530 APOBRQ0VD83 1088 aa23.07■■□□□ 1.28
PNN-205ENST00000556530 NCAPG2Q86XI2 1143 aa23.07■■□□□ 1.28
PNN-205ENST00000556530 CTCFLQ8NI51 663 aaPredicted RBP23.07■■□□□ 1.28
PNN-205ENST00000556530 MOV10L1Q9BXT6 1211 aaKnown RBP23.07■■□□□ 1.28
PNN-205ENST00000556530 SLC38A10Q9HBR0 1119 aa23.07■■□□□ 1.28
PNN-205ENST00000556530 MAD2L2Q9UI95 211 aa23.07■■□□□ 1.28
PNN-205ENST00000556530 BRPF3Q9ULD4 1205 aa23.07■■□□□ 1.28
PNN-205ENST00000556530 A0A0G2JMZ2 1700 aa23.06■■□□□ 1.28
PNN-205ENST00000556530 STAT3P40763 770 aa23.06■■□□□ 1.28
PNN-205ENST00000556530 CTU1Q7Z7A3 348 aaKnown RBP23.06■■□□□ 1.28
PNN-205ENST00000556530 SGMS1Q86VZ5 419 aa23.06■■□□□ 1.28
PNN-205ENST00000556530 MICU3Q86XE3 530 aa23.06■■□□□ 1.28
PNN-205ENST00000556530 REPS2Q8NFH8 660 aa23.06■■□□□ 1.28
PNN-205ENST00000556530 PALM3A6NDB9 673 aaPredicted RBP23.05■■□□□ 1.28
PNN-205ENST00000556530 CALM1P0DP23 149 aa23.05■■□□□ 1.28
PNN-205ENST00000556530 CALM2P0DP24 149 aa23.05■■□□□ 1.28
PNN-205ENST00000556530 CALM3P0DP25 149 aa23.05■■□□□ 1.28
PNN-205ENST00000556530 FDX1P10109 184 aa23.05■■□□□ 1.28
PNN-205ENST00000556530 MAPK4P31152 587 aa23.05■■□□□ 1.28
PNN-205ENST00000556530 SNRNP48Q6IEG0 339 aaKnown RBP23.05■■□□□ 1.28
PNN-205ENST00000556530 OTOP1Q7RTM1 612 aa23.05■■□□□ 1.28
PNN-205ENST00000556530 COA7Q96BR5 231 aa23.05■■□□□ 1.28
PNN-205ENST00000556530 LARP6Q9BRS8 491 aaKnown RBP23.05■■□□□ 1.28
PNN-205ENST00000556530 BACH2Q9BYV9 841 aa23.05■■□□□ 1.28
PNN-205ENST00000556530 ZBTB43O43298 467 aa23.04■■□□□ 1.28
PNN-205ENST00000556530 ERCC3P19447 782 aa23.04■■□□□ 1.28
PNN-205ENST00000556530 HOXD10P28358 340 aa23.04■■□□□ 1.28
PNN-205ENST00000556530 KIF5BP33176 963 aa23.04■■□□□ 1.28
PNN-205ENST00000556530 APOA5Q6Q788 366 aa23.04■■□□□ 1.28
PNN-205ENST00000556530 ADGRF4Q8IZF3 695 aa23.04■■□□□ 1.28
PNN-205ENST00000556530 AGBL1Q96MI9 1066 aa23.04■■□□□ 1.28
PNN-205ENST00000556530 ZNF214Q9UL59 606 aaPredicted RBP23.04■■□□□ 1.28
PNN-205ENST00000556530 COL13A1Q5TAT6 717 aaPredicted RBP23.03■■□□□ 1.28
PNN-205ENST00000556530 GPR142Q7Z601 462 aa23.03■■□□□ 1.28
PNN-205ENST00000556530 PLEKHH3Q7Z736 793 aa23.03■■□□□ 1.28
PNN-205ENST00000556530 RIOX2Q8IUF8 465 aa23.03■■□□□ 1.28
PNN-205ENST00000556530 FANCBQ8NB91 859 aa23.03■■□□□ 1.28
PNN-205ENST00000556530 TEX13BQ9BXU2 312 aa23.03■■□□□ 1.28
PNN-205ENST00000556530 RANBP17Q9H2T7 1088 aaKnown RBP23.03■■□□□ 1.28
PNN-205ENST00000556530 DOCK3Q8IZD9 2030 aa23.03■■□□□ 1.28
PNN-205ENST00000556530 SLC25A27O95847 323 aa23.02■■□□□ 1.28
PNN-205ENST00000556530 TAL1P17542 331 aaPredicted RBP23.02■■□□□ 1.28
PNN-205ENST00000556530 TOB2Q14106 344 aaPredicted RBP23.02■■□□□ 1.28
PNN-205ENST00000556530 PIBF1Q8WXW3 757 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms