RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TMEM110Q86TL2 294 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 MFN1Q8IWA4 741 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 SMYD1Q8NB12 490 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 NGDNQ8NEJ9 315 aaKnown RBP7.02□□□□□ -1.29
TDP1-215ENST00000556498 TBC1D5Q92609 795 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 PPP1R14BQ96C90 147 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 KIF1BPQ96EK5 621 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 SAAL1Q96ER3 474 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 CAPS2Q9BXY5 557 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 CD248Q9HCU0 757 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 ABI2Q9NYB9 513 aaPredicted RBP7.02□□□□□ -1.29
TDP1-215ENST00000556498 IP6K2Q9UHH9 426 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 CCDC88BA6NC98 1476 aa7.02□□□□□ -1.29
TDP1-215ENST00000556498 A0A087WUV0 522 aaPredicted RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 GTPBP10A4D1E9 387 aaKnown RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 TMEM232C9JQI7 657 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 BOLA2-SMG1P6H3BVE0 249 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 C2CD2LO14523 706 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 EIF1AYO14602 144 aaKnown RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 ATP8B1O43520 1251 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 CLASP2O75122 1294 aaKnown RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 S100BP04271 92 aaPredicted RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 ZNF16P17020 682 aaPredicted RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 KIF5BP33176 963 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 CASP2P42575 452 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 RAB27AP51159 221 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 TUBA1BP68363 451 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 TAGLNQ01995 201 aaKnown RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 NUCB1Q02818 461 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 DDR1Q08345 913 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 ENOX2Q16206 610 aaKnown RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 GNPTABQ3T906 1256 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.01□□□□□ -1.29
TDP1-215ENST00000556498 SH2D4BQ5SQS7 431 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 TTC39BQ5VTQ0 682 aaPredicted RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 CCBE1Q6UXH8 406 aaPredicted RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 TUBA1AQ71U36 451 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 KRT25Q7Z3Z0 450 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 C11orf74Q86VG3 221 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 WDR63Q8IWG1 891 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 GPR161Q8N6U8 529 aaKnown RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 ARL10Q8N8L6 244 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 SLC43A3Q8NBI5 491 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 CCDC150Q8NCX0 1101 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 RASSF8Q8NHQ8 419 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 SNX29Q8TEQ0 813 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 GIPC2Q8TF65 315 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 ERP27Q96DN0 273 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 CSRNP1Q96S65 589 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 DNAJC25Q9H1X3 360 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 CCDC68Q9H2F9 335 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 MMADHCQ9H3L0 296 aaPredicted RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 ZFYVE28Q9HCC9 887 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 CNTN3Q9P232 1028 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 ZFATQ9P243 1243 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 HDAC6Q9UBN7 1215 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 POLG2Q9UHN1 485 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 FOXD3Q9UJU5 478 aaPredicted RBP7.01□□□□□ -1.29
TDP1-215ENST00000556498 TTLL3Q9Y4R7 772 aa7.01□□□□□ -1.29
TDP1-215ENST00000556498 ROCK1Q13464 1354 aa7□□□□□ -1.29
TDP1-215ENST00000556498 A0A1W2PRQ8 180 aa7□□□□□ -1.29
TDP1-215ENST00000556498 GOLGA6L4A6NEF3 574 aa7□□□□□ -1.29
TDP1-215ENST00000556498 TERTO14746 1132 aaKnown RBP7□□□□□ -1.29
TDP1-215ENST00000556498 CPLX1O14810 134 aa7□□□□□ -1.29
TDP1-215ENST00000556498 DIAPH2O60879 1101 aa7□□□□□ -1.29
TDP1-215ENST00000556498 MAP3K6O95382 1288 aa7□□□□□ -1.29
TDP1-215ENST00000556498 VSIG8P0DPA2 414 aa7□□□□□ -1.29
TDP1-215ENST00000556498 IDO1P14902 403 aa7□□□□□ -1.29
TDP1-215ENST00000556498 S100A5P33763 92 aa7□□□□□ -1.29
TDP1-215ENST00000556498 MATR3P43243 847 aaKnown RBP eCLIP7□□□□□ -1.29
TDP1-215ENST00000556498 CCT8P50990 548 aa7□□□□□ -1.29
TDP1-215ENST00000556498 HDAC4P56524 1084 aa7□□□□□ -1.29
TDP1-215ENST00000556498 SLC8A3P57103 927 aa7□□□□□ -1.29
TDP1-215ENST00000556498 ZBED6P86452 979 aa7□□□□□ -1.29
TDP1-215ENST00000556498 IKQ13123 557 aaPredicted RBP7□□□□□ -1.29
TDP1-215ENST00000556498 PABPC4Q13310 644 aaKnown RBP eCLIP7□□□□□ -1.29
TDP1-215ENST00000556498 MPP3Q13368 585 aa7□□□□□ -1.29
TDP1-215ENST00000556498 LAMB3Q13751 1172 aa7□□□□□ -1.29
TDP1-215ENST00000556498 UBE4AQ14139 1066 aa7□□□□□ -1.29
TDP1-215ENST00000556498 GAS6Q14393 721 aa7□□□□□ -1.29
TDP1-215ENST00000556498 LONRF1Q17RB8 773 aa7□□□□□ -1.29
TDP1-215ENST00000556498 LRRC23Q53EV4 343 aaPredicted RBP7□□□□□ -1.29
TDP1-215ENST00000556498 AKNAD1Q5T1N1 836 aa7□□□□□ -1.29
TDP1-215ENST00000556498 ISM2Q6H9L7 571 aa7□□□□□ -1.29
TDP1-215ENST00000556498 RCSD1Q6JBY9 416 aa7□□□□□ -1.29
TDP1-215ENST00000556498 SAPCD2Q86UD0 394 aa7□□□□□ -1.29
TDP1-215ENST00000556498 APLFQ8IW19 511 aaPredicted RBP7□□□□□ -1.29
TDP1-215ENST00000556498 CCDC170Q8IYT3 715 aa7□□□□□ -1.29
TDP1-215ENST00000556498 MSANTD4Q8NCY6 345 aa7□□□□□ -1.29
TDP1-215ENST00000556498 ZNF397Q8NF99 534 aaPredicted RBP7□□□□□ -1.29
TDP1-215ENST00000556498 CTCFLQ8NI51 663 aaPredicted RBP7□□□□□ -1.29
TDP1-215ENST00000556498 ACMSDQ8TDX5 336 aa7□□□□□ -1.29
TDP1-215ENST00000556498 RPGRQ92834 1020 aaKnown RBP7□□□□□ -1.29
TDP1-215ENST00000556498 EPSTI1Q96J88 318 aa7□□□□□ -1.29
TDP1-215ENST00000556498 PNMA5Q96PV4 448 aa7□□□□□ -1.29
TDP1-215ENST00000556498 SPAG5Q96R06 1193 aa7□□□□□ -1.29
TDP1-215ENST00000556498 TSGA10Q9BZW7 698 aa7□□□□□ -1.29
TDP1-215ENST00000556498 TANGO6Q9C0B7 1094 aa7□□□□□ -1.29
TDP1-215ENST00000556498 BRD8Q9H0E9 1235 aa7□□□□□ -1.29
TDP1-215ENST00000556498 CHRDQ9H2X0 955 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms