RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CTDP1Q9Y5B0 961 aaPredicted RBP17.87■□□□□ 0.45
ACTN1-217ENST00000556203 TAF6LQ9Y6J9 622 aa17.87■□□□□ 0.45
ACTN1-217ENST00000556203 MYH4Q9Y623 1939 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 ZBED4O75132 1171 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 RGS19P49795 217 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 RIOX2Q8IUF8 465 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 CPXCR1Q8N123 301 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 CHURC1Q8WUH1 139 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 TRIB2Q92519 343 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 UBAC1Q9BSL1 405 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 TEX13BQ9BXU2 312 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 SLC38A10Q9HBR0 1119 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 TNKSO95271 1327 aa17.86■□□□□ 0.45
ACTN1-217ENST00000556203 STRNO43815 780 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 PLA2G6O60733 806 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 HMGCRP04035 888 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 PDHBP11177 359 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 CCL5P13501 91 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 ZKSCAN1P17029 563 aaPredicted RBP17.85■□□□□ 0.45
ACTN1-217ENST00000556203 FRMPD2Q68DX3 1309 aaPredicted RBP17.85■□□□□ 0.45
ACTN1-217ENST00000556203 SNRNP48Q6IEG0 339 aaKnown RBP17.85■□□□□ 0.45
ACTN1-217ENST00000556203 STOX1Q6ZVD7 989 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 CYB5R4Q7L1T6 521 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 ENAHQ8N8S7 591 aaPredicted RBP17.85■□□□□ 0.45
ACTN1-217ENST00000556203 ANKS1AQ92625 1134 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 RNF208Q9H0X6 261 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 UNC93B1Q9H1C4 597 aa17.85■□□□□ 0.45
ACTN1-217ENST00000556203 RAVER2Q9HCJ3 691 aaKnown RBP17.85■□□□□ 0.45
ACTN1-217ENST00000556203 E7EWF7 191 aa17.84■□□□□ 0.45
ACTN1-217ENST00000556203 EN2P19622 333 aaPredicted RBP17.84■□□□□ 0.45
ACTN1-217ENST00000556203 ADORA2AP29274 412 aa17.84■□□□□ 0.45
ACTN1-217ENST00000556203 COPB2P35606 906 aa17.84■□□□□ 0.45
ACTN1-217ENST00000556203 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
ACTN1-217ENST00000556203 TRIM32Q13049 653 aa17.84■□□□□ 0.45
ACTN1-217ENST00000556203 CCL14Q16627 93 aa17.84■□□□□ 0.45
ACTN1-217ENST00000556203 TTBK2Q6IQ55 1244 aa17.84■□□□□ 0.45
ACTN1-217ENST00000556203 RALYLQ86SE5 291 aaKnown RBP17.84■□□□□ 0.45
ACTN1-217ENST00000556203 TRMT44Q8IYL2 757 aaKnown RBP17.84■□□□□ 0.45
ACTN1-217ENST00000556203 NCOA7Q8NI08 942 aa17.84■□□□□ 0.45
ACTN1-217ENST00000556203 KAT14Q9H8E8 782 aa17.84■□□□□ 0.45
ACTN1-217ENST00000556203 DOCK3Q8IZD9 2030 aa17.83■□□□□ 0.45
ACTN1-217ENST00000556203 ATP2A1O14983 1001 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 FDX1P10109 184 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 FCER1AP12319 257 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 SLC16A2P36021 539 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 DPP9Q86TI2 863 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 ABRAQ8N0Z2 381 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 NPLOC4Q8TAT6 608 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 MMP19Q99542 508 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 GPCPD1Q9NPB8 672 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 PRR12Q9ULL5 1215 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 RIPK3Q9Y572 518 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 PARP14Q460N5 1801 aa17.83■□□□□ 0.44
ACTN1-217ENST00000556203 PLXNB2O15031 1838 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 SLC27A2O14975 620 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 COBLO75128 1261 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 HOXC6P09630 235 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 OAZ1P54368 228 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 SNAP25P60880 206 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 ZNF543Q08ER8 600 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 IFIT1BQ5T764 474 aaKnown RBP17.82■□□□□ 0.44
ACTN1-217ENST00000556203 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 FLRT1Q9NZU1 646 aa17.82■□□□□ 0.44
ACTN1-217ENST00000556203 GJB1P08034 283 aa17.81■□□□□ 0.44
ACTN1-217ENST00000556203 PRKAR2AP13861 404 aaKnown RBP17.81■□□□□ 0.44
ACTN1-217ENST00000556203 MLLT1Q03111 559 aaPredicted RBP17.81■□□□□ 0.44
ACTN1-217ENST00000556203 KCTD2Q14681 263 aa17.81■□□□□ 0.44
ACTN1-217ENST00000556203 NECTIN1Q15223 517 aa17.81■□□□□ 0.44
ACTN1-217ENST00000556203 SEC23AQ15436 765 aa17.81■□□□□ 0.44
ACTN1-217ENST00000556203 SYDE2Q5VT97 1194 aa17.81■□□□□ 0.44
ACTN1-217ENST00000556203 CCDC174Q6PII3 467 aa17.81■□□□□ 0.44
ACTN1-217ENST00000556203 BTNL9Q6UXG8 535 aa17.81■□□□□ 0.44
ACTN1-217ENST00000556203 CENPFP49454 3210 aa17.8■□□□□ 0.44
ACTN1-217ENST00000556203 ZNF536O15090 1300 aa17.8■□□□□ 0.44
ACTN1-217ENST00000556203 GOLGA8HP0CJ92 632 aa17.8■□□□□ 0.44
ACTN1-217ENST00000556203 MAP3K21Q5TCX8 1036 aa17.8■□□□□ 0.44
ACTN1-217ENST00000556203 CHST3Q7LGC8 479 aa17.8■□□□□ 0.44
ACTN1-217ENST00000556203 MB21D2Q8IYB1 491 aaPredicted RBP17.8■□□□□ 0.44
ACTN1-217ENST00000556203 AGBL1Q96MI9 1066 aa17.8■□□□□ 0.44
ACTN1-217ENST00000556203 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.8■□□□□ 0.446e-7■■□□□ 11.8
ACTN1-217ENST00000556203 SLC5A4Q9NY91 659 aa17.8■□□□□ 0.44
ACTN1-217ENST00000556203 RPTORQ8N122 1335 aa17.79■□□□□ 0.44
ACTN1-217ENST00000556203 ERICH2A1L162 156 aa17.79■□□□□ 0.44
ACTN1-217ENST00000556203 IFIT3O14879 490 aaKnown RBP17.79■□□□□ 0.44
ACTN1-217ENST00000556203 PGK2P07205 417 aa17.79■□□□□ 0.44
ACTN1-217ENST00000556203 GJA8P48165 433 aa17.79■□□□□ 0.44
ACTN1-217ENST00000556203 CACNB2Q08289 660 aaPredicted RBP17.79■□□□□ 0.44
ACTN1-217ENST00000556203 GPATCH4Q5T3I0 446 aaKnown RBP17.79■□□□□ 0.44
ACTN1-217ENST00000556203 MFSD14CQ5VZR4 134 aa17.79■□□□□ 0.44
ACTN1-217ENST00000556203 DEFB118Q96PH6 123 aa17.79■□□□□ 0.44
ACTN1-217ENST00000556203 RANBP17Q9H2T7 1088 aaKnown RBP17.79■□□□□ 0.44
ACTN1-217ENST00000556203 HMX1Q9NP08 348 aaPredicted RBP17.79■□□□□ 0.44
ACTN1-217ENST00000556203 PAK6Q9NQU5 681 aaPredicted RBP17.79■□□□□ 0.44
ACTN1-217ENST00000556203 HOMER2Q9NSB8 354 aa17.79■□□□□ 0.44
ACTN1-217ENST00000556203 ANTXR2P58335 489 aa17.78■□□□□ 0.44
ACTN1-217ENST00000556203 SART3Q15020 963 aaKnown RBP17.78■□□□□ 0.44
ACTN1-217ENST00000556203 RNF20Q5VTR2 975 aa17.78■□□□□ 0.44
ACTN1-217ENST00000556203 OLFML2BQ68BL8 750 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms