RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 UBE2OQ9C0C9 1292 aaKnown RBP25.65■■□□□ 1.7
SDR39U1-216ENST00000556175 ATN1P54259 1190 aaPredicted RBP25.64■■□□□ 1.7
SDR39U1-216ENST00000556175 OAZ1P54368 228 aa25.64■■□□□ 1.7
SDR39U1-216ENST00000556175 TFAP4Q01664 338 aa25.64■■□□□ 1.7
SDR39U1-216ENST00000556175 ANO1Q5XXA6 986 aa25.64■■□□□ 1.7
SDR39U1-216ENST00000556175 TDHQ8IZJ6 230 aa25.64■■□□□ 1.7
SDR39U1-216ENST00000556175 PRKAG2Q9UGJ0 569 aa25.64■■□□□ 1.7
SDR39U1-216ENST00000556175 CNPY2Q9Y2B0 182 aa25.64■■□□□ 1.7
SDR39U1-216ENST00000556175 LAMA3Q16787 3333 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 MYCNP04198 464 aaPredicted RBP25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 FDX1P10109 184 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 RARBP10826 455 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 BMP3P12645 472 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 FAM47AQ5JRC9 791 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 SLFN13Q68D06 897 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 DDX11Q96FC9 970 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 SLC38A10Q9HBR0 1119 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 HELLSQ9NRZ9 838 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 FBXO40Q9UH90 709 aa25.63■■□□□ 1.69
SDR39U1-216ENST00000556175 PDE1AP54750 535 aa25.62■■□□□ 1.69
SDR39U1-216ENST00000556175 CPXCR1Q8N123 301 aa25.62■■□□□ 1.69
SDR39U1-216ENST00000556175 TSPY2A6NKD2 308 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 SOX1O00570 391 aaPredicted RBP25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 AKR1A1P14550 325 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 RTP1P59025 263 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 LRRC41Q15345 812 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 LRIT3Q3SXY7 679 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 GPR153Q6NV75 609 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 CCDC129Q6ZRS4 1044 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 GMCL1Q96IK5 515 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 LBHD1Q9BQE6 289 aaPredicted RBP25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 XPNPEP3Q9NQH7 507 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 ISY1Q9ULR0 285 aaKnown RBP25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 SYNGAP1Q96PV0 1343 aa25.61■■□□□ 1.69
SDR39U1-216ENST00000556175 STAT2P52630 851 aa25.6■■□□□ 1.69
SDR39U1-216ENST00000556175 SLC39A5Q6ZMH5 540 aa25.6■■□□□ 1.69
SDR39U1-216ENST00000556175 RNF180Q86T96 592 aa25.6■■□□□ 1.69
SDR39U1-216ENST00000556175 CHST13Q8NET6 341 aa25.6■■□□□ 1.69
SDR39U1-216ENST00000556175 STX8Q9UNK0 236 aa25.6■■□□□ 1.69
SDR39U1-216ENST00000556175 ATP11BQ9Y2G3 1177 aa25.6■■□□□ 1.69
SDR39U1-216ENST00000556175 RIPK3Q9Y572 518 aa25.6■■□□□ 1.69
SDR39U1-216ENST00000556175 DNAH12Q6ZR08 3092 aa25.6■■□□□ 1.69
SDR39U1-216ENST00000556175 FOXP2O15409 715 aa25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 SLC1A4P43007 532 aa25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 SLC4A3P48751 1232 aa25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 MDM2Q00987 491 aaPredicted RBP25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 ZNF467Q7Z7K2 595 aaPredicted RBP25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 FAM160B2Q86V87 743 aa25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 CHURC1Q8WUH1 139 aa25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 LRCH3Q96II8 777 aa25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 RAVER2Q9HCJ3 691 aaKnown RBP25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 ANAPC4Q9UJX5 808 aa25.59■■□□□ 1.69
SDR39U1-216ENST00000556175 DNAJC25-GNG10A0A024R161 153 aa25.58■■□□□ 1.69
SDR39U1-216ENST00000556175 TMEM232C9JQI7 657 aa25.58■■□□□ 1.69
SDR39U1-216ENST00000556175 SNX17Q15036 470 aa25.58■■□□□ 1.69
SDR39U1-216ENST00000556175 MAMDC4Q6UXC1 1216 aa25.58■■□□□ 1.69
SDR39U1-216ENST00000556175 ANKRD35Q8N283 1001 aa25.58■■□□□ 1.69
SDR39U1-216ENST00000556175 ZNF865P0CJ78 1059 aaPredicted RBP25.57■■□□□ 1.68
SDR39U1-216ENST00000556175 ADCYAP1R1P41586 468 aa25.57■■□□□ 1.68
SDR39U1-216ENST00000556175 CTDSPL2Q05D32 466 aa25.57■■□□□ 1.68
SDR39U1-216ENST00000556175 IKQ13123 557 aaPredicted RBP25.57■■□□□ 1.68
SDR39U1-216ENST00000556175 ALX1Q15699 326 aa25.57■■□□□ 1.68
SDR39U1-216ENST00000556175 MCMDC2Q4G0Z9 681 aa25.57■■□□□ 1.68
SDR39U1-216ENST00000556175 C1orf53Q5VUE5 145 aa25.57■■□□□ 1.68
SDR39U1-216ENST00000556175 RWDD1Q9H446 243 aaPredicted RBP25.57■■□□□ 1.68
SDR39U1-216ENST00000556175 PHF24Q9UPV7 400 aa25.57■■□□□ 1.68
SDR39U1-216ENST00000556175 ORC4O43929 436 aa25.56■■□□□ 1.68
SDR39U1-216ENST00000556175 TAL1P17542 331 aaPredicted RBP25.56■■□□□ 1.68
SDR39U1-216ENST00000556175 VPS53Q5VIR6 699 aa25.56■■□□□ 1.68
SDR39U1-216ENST00000556175 STAG1Q8WVM7 1258 aa25.56■■□□□ 1.68
SDR39U1-216ENST00000556175 YTHDC1Q96MU7 727 aaKnown RBP25.56■■□□□ 1.68
SDR39U1-216ENST00000556175 FAM184BQ9ULE4 1060 aa25.56■■□□□ 1.68
SDR39U1-216ENST00000556175 RANBP6O60518 1105 aaKnown RBP25.55■■□□□ 1.68
SDR39U1-216ENST00000556175 PLA2G6O60733 806 aa25.55■■□□□ 1.68
SDR39U1-216ENST00000556175 FERMT2Q96AC1 680 aa25.55■■□□□ 1.68
SDR39U1-216ENST00000556175 ZMYM6O95789 1325 aa25.55■■□□□ 1.68
SDR39U1-216ENST00000556175 MCCP23508 829 aa25.54■■□□□ 1.68
SDR39U1-216ENST00000556175 TRIM60Q495X7 471 aa25.54■■□□□ 1.68
SDR39U1-216ENST00000556175 LNPKQ9C0E8 428 aa25.54■■□□□ 1.68
SDR39U1-216ENST00000556175 ACAD9Q9H845 621 aa25.54■■□□□ 1.68
SDR39U1-216ENST00000556175 ZHX1Q9UKY1 873 aaPredicted RBP25.54■■□□□ 1.68
SDR39U1-216ENST00000556175 SMCHD1A6NHR9 2005 aa25.54■■□□□ 1.68
SDR39U1-216ENST00000556175 A0A0D9SFI3 127 aa25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 TRIM6-TRIM34B2RNG4 842 aa25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 SNAI1O95863 264 aaPredicted RBP25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 PGK1P00558 417 aa25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 FGRP09769 529 aa25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 TKFCQ3LXA3 575 aa25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 RCSD1Q6JBY9 416 aa25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 SMC5Q8IY18 1101 aa25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 FAM227BQ96M60 508 aa25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 PRDM5Q9NQX1 630 aaPredicted RBP25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 IL17RBQ9NRM6 502 aa25.53■■□□□ 1.68
SDR39U1-216ENST00000556175 TSEN34Q9BSV6 310 aaKnown RBP25.52■■□□□ 1.68
SDR39U1-216ENST00000556175 ABHD16BQ9H3Z7 469 aa25.52■■□□□ 1.68
SDR39U1-216ENST00000556175 TOMM22Q9NS69 142 aa25.52■■□□□ 1.68
SDR39U1-216ENST00000556175 HOMER2Q9NSB8 354 aa25.52■■□□□ 1.68
SDR39U1-216ENST00000556175 LTBP2Q14767 1821 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms