RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 KIFC2Q96AC6 838 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 ATG4CQ96DT6 458 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 ZCCHC17Q9NP64 241 aaKnown RBP13.37□□□□□ -0.27
GABRB3-210ENST00000556166 RBPJLQ9UBG7 517 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 PPP1R9AQ9ULJ8 1098 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 PRR12Q9ULL5 1215 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 ISY1Q9ULR0 285 aaKnown RBP13.37□□□□□ -0.27
GABRB3-210ENST00000556166 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 MYH4Q9Y623 1939 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 LOC285556D6RIA3 1793 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 ADGRA2Q96PE1 1338 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 GOLGA8AA7E2F4 631 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 PFKFB2O60825 505 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 TRPA1O75762 1119 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 CNMDO75829 334 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 RCAN1P53805 252 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 IRX3P78415 501 aaPredicted RBP13.37□□□□□ -0.27
GABRB3-210ENST00000556166 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
GABRB3-210ENST00000556166 CRHR2Q13324 411 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 OTUD7BQ6GQQ9 843 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 PRPF38AQ8NAV1 312 aaKnown RBP13.37□□□□□ -0.27
GABRB3-210ENST00000556166 REPS2Q8NFH8 660 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 CHURC1Q8WUH1 139 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 HOXC10Q9NYD6 342 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 VWA5AO00534 786 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 CA12O43570 354 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 METAP2P50579 478 aaKnown RBP eCLIP13.36□□□□□ -0.27
GABRB3-210ENST00000556166 STAT2P52630 851 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 SCRN1Q12765 414 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-210ENST00000556166 NTRK3Q16288 839 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 RTN1Q16799 776 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 Q3C1V9 767 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 SYDE2Q5VT97 1194 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 TMTC3Q6ZXV5 915 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 FAM160B2Q86V87 743 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 ADGRF4Q8IZF3 695 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 CTCFLQ8NI51 663 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-210ENST00000556166 RIOX1Q9H6W3 641 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 JMJD4Q9H9V9 463 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 VAT1LQ9HCJ6 419 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 WBP1LQ9NX94 342 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 BTBD7Q9P203 1132 aa13.36□□□□□ -0.27
GABRB3-210ENST00000556166 NID2Q14112 1375 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 ST18O60284 1047 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 PPFIA3O75145 1194 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 KIF5BP33176 963 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
GABRB3-210ENST00000556166 LBX2Q6XYB7 198 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 CCDC82Q8N4S0 544 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 JMYQ8N9B5 988 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 MTMR8Q96EF0 704 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 PARK7Q99497 189 aaKnown RBP13.35□□□□□ -0.27
GABRB3-210ENST00000556166 SLC38A10Q9HBR0 1119 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 CPA4Q9UI42 421 aa13.35□□□□□ -0.27
GABRB3-210ENST00000556166 THSD7BQ9C0I4 1608 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 ZNF536O15090 1300 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 TLR2O60603 784 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 CTDNEP1O95476 244 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 TAL1P17542 331 aaPredicted RBP13.34□□□□□ -0.27
GABRB3-210ENST00000556166 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 C17orf99Q6UX52 265 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 CFHR5Q9BXR6 569 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
GABRB3-210ENST00000556166 ZFYVE28Q9HCC9 887 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 MYPNQ86TC9 1320 aa13.34□□□□□ -0.27
GABRB3-210ENST00000556166 RLFQ13129 1914 aa13.33□□□□□ -0.27
GABRB3-210ENST00000556166 hCG_1642624A0A1W2PR95 340 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 PPP1R11O60927 126 aaPredicted RBP13.33□□□□□ -0.28
GABRB3-210ENST00000556166 BCRP11274 1271 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 SMARCA1P28370 1054 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 GNAQP50148 359 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 MAP2K1Q02750 393 aaPredicted RBP13.33□□□□□ -0.28
GABRB3-210ENST00000556166 ANKRD13CQ8N6S4 541 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 IL27Q8NEV9 243 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 PIBF1Q8WXW3 757 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 LZTS2Q9BRK4 669 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 SPZ1Q9BXG8 430 aa13.33□□□□□ -0.28
GABRB3-210ENST00000556166 RANBP17Q9H2T7 1088 aaKnown RBP13.33□□□□□ -0.28
GABRB3-210ENST00000556166 RBM28Q9NW13 759 aaKnown RBP13.33□□□□□ -0.28
GABRB3-210ENST00000556166 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-210ENST00000556166 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 CCDC174Q6PII3 467 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 SMCR8Q8TEV9 937 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-210ENST00000556166 GTF3C6Q969F1 213 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 SNX21Q969T3 373 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 ZSCAN31Q96LW9 406 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-210ENST00000556166 AGBL1Q96MI9 1066 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 PIGSQ96S52 555 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 PAGR1Q9BTK6 254 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
GABRB3-210ENST00000556166 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 ZNF214Q9UL59 606 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-210ENST00000556166 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms