RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 CATSPERGQ6ZRH7 1159 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 TANGO6Q9C0B7 1094 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 ATP8A2Q9NTI2 1148 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 SWAP70Q9UH65 585 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 RABGAP1Q9Y3P9 1069 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 SLC4A4Q9Y6R1 1079 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 COL11A1P12107 1806 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-216ENST00000556066 PARP14Q460N5 1801 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 FRMPD3Q5JV73 1810 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 RLFQ13129 1914 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 A0A1W2PRG0 241 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L12C9JPN9 530 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L21D6R901 530 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 SMIM22K7EJ46 135 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 RAD21O60216 631 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 CNMDO75829 334 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 GLRX3O76003 335 aaKnown RBP8.04□□□□□ -1.12
PSEN1-216ENST00000556066 XRCC5P13010 732 aaKnown RBP8.04□□□□□ -1.12
PSEN1-216ENST00000556066 ICA1Q05084 483 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 UBE3CQ15386 1083 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 TSHZ3Q63HK5 1081 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 TMEM179Q6ZVK1 233 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 NECAB2Q7Z6G3 386 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 TRMT44Q8IYL2 757 aaKnown RBP8.04□□□□□ -1.12
PSEN1-216ENST00000556066 SPICE1Q8N0Z3 855 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 STK11IPQ8N1F8 1099 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 DIS3LQ8TF46 1054 aaKnown RBP8.04□□□□□ -1.12
PSEN1-216ENST00000556066 GPATCH3Q96I76 525 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 ARHGEF10LQ9HCE6 1279 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 ECHDC1Q9NTX5 307 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 BTBD7Q9P203 1132 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 IVNS1ABPQ9Y6Y0 642 aa8.04□□□□□ -1.12
PSEN1-216ENST00000556066 MYH4Q9Y623 1939 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 PPP1R3GB7ZBB8 358 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 FLOT1O75955 427 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 AKR1B1P15121 316 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 CAPN2P17655 700 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 CCND3P30281 292 aaPredicted RBP8.03□□□□□ -1.12
PSEN1-216ENST00000556066 CDK8P49336 464 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 CACNB2Q08289 660 aaPredicted RBP8.03□□□□□ -1.12
PSEN1-216ENST00000556066 PLS1Q14651 629 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 COG2Q14746 738 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 MORN1Q5T089 497 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 C12orf60Q5U649 245 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 LAPTM4BQ86VI4 370 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 USP6NLQ92738 828 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 LRCH3Q96II8 777 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 APBA2Q99767 749 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 PUS7LQ9H0K6 701 aaKnown RBP8.03□□□□□ -1.12
PSEN1-216ENST00000556066 DCTPP1Q9H773 170 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 SH2D4AQ9H788 454 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 HOXC10Q9NYD6 342 aa8.03□□□□□ -1.12
PSEN1-216ENST00000556066 SLC15A5A6NIM6 579 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 MINDY4BA8MYZ0 360 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 TRIM66O15016 1216 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 HMGB1P09429 215 aaKnown RBP8.02□□□□□ -1.13
PSEN1-216ENST00000556066 CNGA1P29973 690 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 KIAA1755Q5JYT7 1200 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 MAP3K21Q5TCX8 1036 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 MFSD14CQ5VZR4 134 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 CTR9Q6PD62 1173 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 LBX2Q6XYB7 198 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 C16orf86Q6ZW13 317 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 DPP9Q86TI2 863 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 C7orf61Q8IZ16 206 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 KBTBD3Q8NAB2 608 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 ANKLE1Q8NAG6 615 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 CCDC17Q96LX7 622 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 C11orf49Q9H6J7 331 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 TMX2Q9Y320 296 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 PLXNA1Q9UIW2 1896 aa8.02□□□□□ -1.13
PSEN1-216ENST00000556066 A0A0G2JMZ2 1700 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 RNF113AO15541 343 aaKnown RBP8.01□□□□□ -1.13
PSEN1-216ENST00000556066 APPP05067 770 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 EEF2P13639 858 aaKnown RBP8.01□□□□□ -1.13
PSEN1-216ENST00000556066 ERCC3P19447 782 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 CYP2C19P33261 490 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 NCAPG2Q86XI2 1143 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 SIAH1Q8IUQ4 282 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 NPLOC4Q8TAT6 608 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 APPBP2Q92624 585 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 LPAR1Q92633 364 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 OSBP2Q969R2 916 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 ATG4CQ96DT6 458 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 STRBPQ96SI9 672 aaKnown RBP8.01□□□□□ -1.13
PSEN1-216ENST00000556066 MOV10L1Q9BXT6 1211 aaKnown RBP8.01□□□□□ -1.13
PSEN1-216ENST00000556066 SPATC1LQ9H0A9 340 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 VCPKMTQ9H867 229 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 KANSL2Q9H9L4 492 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 MKNK2Q9HBH9 465 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 FLRT1Q9NZU1 646 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 ARPP21Q9UBL0 812 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-216ENST00000556066 STAP2Q9UGK3 403 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 OGDHLQ9ULD0 1010 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 ZMYND8Q9ULU4 1186 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-216ENST00000556066 SMCHD1A6NHR9 2005 aa8.01□□□□□ -1.13
PSEN1-216ENST00000556066 UNC80Q8N2C7 3258 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 GREB1LQ9C091 1923 aaPredicted RBP8□□□□□ -1.13
PSEN1-216ENST00000556066 SOWAHBA6NEL2 793 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms