RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ECHDC1Q9NTX5 307 aa17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 PRKAG2Q9UGJ0 569 aa17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
CHMP4BP1-201ENST00000556017 A0A1W2PQ45 241 aaPredicted RBP17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 A0A1W2PQY0 241 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 RARBP10826 455 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 KCTD2Q14681 263 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 GIMAP6Q6P9H5 292 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 MAMDC4Q6UXC1 1216 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 STK11IPQ8N1F8 1099 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 KLHDC9Q8NEP7 349 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 CDX2Q99626 313 aaPredicted RBP17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 SLF1Q9BQI6 1058 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 SEMA6BQ9H3T3 888 aa17.22■□□□□ 0.35
CHMP4BP1-201ENST00000556017 LCTP09848 1927 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 MYADML2A6NDP7 307 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 M0R2C6 588 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 KIAA0355O15063 1070 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 ZSCAN25Q6NSZ9 544 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 APPBP2Q92624 585 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 MKL1Q969V6 931 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 TEX13BQ9BXU2 312 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 DCTPP1Q9H773 170 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 LRRC37A2A6NM11 1700 aa17.21■□□□□ 0.35
CHMP4BP1-201ENST00000556017 SYNRGQ9UMZ2 1314 aa17.21■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CLTBP09497 229 aa17.2■□□□□ 0.34
CHMP4BP1-201ENST00000556017 AKR1A1P14550 325 aa17.2■□□□□ 0.34
CHMP4BP1-201ENST00000556017 SMAD3P84022 425 aaKnown RBP17.2■□□□□ 0.34
CHMP4BP1-201ENST00000556017 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
CHMP4BP1-201ENST00000556017 SNRNP48Q6IEG0 339 aaKnown RBP17.2■□□□□ 0.34
CHMP4BP1-201ENST00000556017 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CEP95Q96GE4 821 aa17.2■□□□□ 0.34
CHMP4BP1-201ENST00000556017 SYNGAP1Q96PV0 1343 aa17.2■□□□□ 0.34
CHMP4BP1-201ENST00000556017 MUC3AQ02505 3323 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 FOXP2O15409 715 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 RNF113AO15541 343 aaKnown RBP17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 GPAA1O43292 621 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 PRDM1O75626 825 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 COPB2P35606 906 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 ZNF697Q5TEC3 545 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 ANKRD33Q7Z3H0 272 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 RNF180Q86T96 592 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 PRPF38AQ8NAV1 312 aaKnown RBP17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 DDRGK1Q96HY6 314 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 SEC62Q99442 399 aaKnown RBP17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 KATNBL1Q9H079 304 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 SLC38A10Q9HBR0 1119 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 MTMR4Q9NYA4 1195 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CLIP2Q9UDT6 1046 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 TACC3Q9Y6A5 838 aa17.19■□□□□ 0.34
CHMP4BP1-201ENST00000556017 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
CHMP4BP1-201ENST00000556017 TTC28Q96AY4 2481 aa17.18■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CTAGE5O15320 804 aa17.18■□□□□ 0.34
CHMP4BP1-201ENST00000556017 RAD21O60216 631 aa17.18■□□□□ 0.34
CHMP4BP1-201ENST00000556017 ACLYP53396 1101 aa17.18■□□□□ 0.34
CHMP4BP1-201ENST00000556017 MSL3Q8N5Y2 521 aaKnown RBP17.18■□□□□ 0.34
CHMP4BP1-201ENST00000556017 TOX2Q96NM4 488 aa17.18■□□□□ 0.34
CHMP4BP1-201ENST00000556017 TSEN34Q9BSV6 310 aaKnown RBP17.18■□□□□ 0.34
CHMP4BP1-201ENST00000556017 RAVER2Q9HCJ3 691 aaKnown RBP17.18■□□□□ 0.34
CHMP4BP1-201ENST00000556017 PQBP1O60828 265 aaKnown RBP17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CDK7P50613 346 aa17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 KCNA10Q16322 511 aa17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 ZNF467Q7Z7K2 595 aaPredicted RBP17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 IFNL3Q8IZI9 196 aa17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 OTUD7AQ8TE49 926 aaPredicted RBP17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CHMP4BQ9H444 224 aaKnown RBP17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 MKNK2Q9HBH9 465 aa17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 TBX21Q9UL17 535 aa17.17■□□□□ 0.34
CHMP4BP1-201ENST00000556017 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CPXCR1Q8N123 301 aa17.16■□□□□ 0.34
CHMP4BP1-201ENST00000556017 LRRC47Q8N1G4 583 aaKnown RBP17.16■□□□□ 0.34
CHMP4BP1-201ENST00000556017 MYLIPQ8WY64 445 aa17.16■□□□□ 0.34
CHMP4BP1-201ENST00000556017 UPF3AQ9H1J1 476 aaKnown RBP17.16■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CHD7Q9P2D1 2997 aa17.16■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CNPY2Q9Y2B0 182 aa17.16■□□□□ 0.34
CHMP4BP1-201ENST00000556017 ASTN1O14525 1302 aa17.16■□□□□ 0.34
CHMP4BP1-201ENST00000556017 ZNF536O15090 1300 aa17.16■□□□□ 0.34
CHMP4BP1-201ENST00000556017 DUSP11O75319 330 aaKnown RBP17.15■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CNTN2Q02246 1040 aa17.15■□□□□ 0.34
CHMP4BP1-201ENST00000556017 ACVR2BQ13705 512 aa17.15■□□□□ 0.34
CHMP4BP1-201ENST00000556017 GMCL1P1Q8NEA9 526 aa17.15■□□□□ 0.34
CHMP4BP1-201ENST00000556017 NEDD1Q8NHV4 660 aa17.15■□□□□ 0.34
CHMP4BP1-201ENST00000556017 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
CHMP4BP1-201ENST00000556017 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.15■□□□□ 0.34
CHMP4BP1-201ENST00000556017 FAM184BQ9ULE4 1060 aa17.15■□□□□ 0.34
CHMP4BP1-201ENST00000556017 SYNPO2Q9UMS6 1093 aa17.15■□□□□ 0.34
CHMP4BP1-201ENST00000556017 REV3LO60673 3130 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 MOXD2PA6NHM9 499 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 PATL2C9JE40 543 aaKnown RBP17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 ZFYP08048 801 aaPredicted RBP17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 RAG1P15918 1043 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 NKX3-2P78367 333 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 FAM133AQ8N9E0 248 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 DDX11Q96FC9 970 aa17.14■□□□□ 0.33
CHMP4BP1-201ENST00000556017 STARD7Q9NQZ5 370 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms