RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 NAPBQ9H115 298 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 SLC38A10Q9HBR0 1119 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 EPB41L4AQ9HCS5 686 aaPredicted RBP9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 HELLSQ9NRZ9 838 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 ANAPC4Q9UJX5 808 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 PHF24Q9UPV7 400 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 CNPY2Q9Y2B0 182 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 CTDP1Q9Y5B0 961 aaPredicted RBP9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 TACC3Q9Y6A5 838 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 BAZ2AQ9UIF9 1905 aaKnown RBP9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 SALL3Q9BXA9 1300 aa9.26□□□□□ -0.93
PTCSC3-201ENST00000556013 PLIN4Q96Q06 1357 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 MYH7P12883 1935 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 M0R2C6 588 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 SOX1O00570 391 aaPredicted RBP9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 BMP3P12645 472 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 RRP1P56182 461 aaKnown RBP9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 RTP1P59025 263 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 NKX3-2P78367 333 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 TFAP4Q01664 338 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 TKFCQ3LXA3 575 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 GJC2Q5T442 439 aaPredicted RBP9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 ANKRD45Q5TZF3 282 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 SLFN13Q68D06 897 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 SNRNP48Q6IEG0 339 aaKnown RBP9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 RCSD1Q6JBY9 416 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 STAG1Q8WVM7 1258 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 GMCL1Q96IK5 515 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 SEC62Q99442 399 aaKnown RBP9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 FSD1Q9BTV5 496 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 ABHD16BQ9H3Z7 469 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 FAM184BQ9ULE4 1060 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 RIPK3Q9Y572 518 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 A0A0G2JMZ2 1700 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 ALPK3Q96L96 1907 aa9.25□□□□□ -0.93
PTCSC3-201ENST00000556013 MOXD2PA6NHM9 499 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 POTEB2H3BUK9 544 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 RAD21O60216 631 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 DUSP11O75319 330 aaKnown RBP9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 SNAI1O95863 264 aaPredicted RBP9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 PGK2P07205 417 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 PCP11498 1178 aaKnown RBP9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 KLHDC9Q8NEP7 349 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 NUP133Q8WUM0 1156 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 LRCH3Q96II8 777 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 TTC14Q96N46 770 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 SEZ6LQ9BYH1 1024 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 XPNPEP3Q9NQH7 507 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 TCP11L1Q9NUJ3 509 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 PNMA2Q9UL42 364 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 MYH8P13535 1937 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 ZNFX1Q9P2E3 1918 aaKnown RBP9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 SMCHD1A6NHR9 2005 aa9.24□□□□□ -0.93
PTCSC3-201ENST00000556013 LOC102724159A0A0B4J2E5 919 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 ORC4O43929 436 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 ADAMTS4O75173 837 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 PRDM1O75626 825 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 CST5P28325 142 aaPredicted RBP9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 ADCYAP1R1P41586 468 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 SLC1A4P43007 532 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 STAT2P52630 851 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 ATN1P54259 1190 aaPredicted RBP9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 PDE1AP54750 535 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 MDM2Q00987 491 aaPredicted RBP9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 ACVR2BQ13705 512 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 PWP2Q15269 919 aaKnown RBP9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 MCMDC2Q4G0Z9 681 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 FAM47AQ5JRC9 791 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 TSHZ3Q63HK5 1081 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 SAMD1Q6SPF0 538 aaPredicted RBP9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 ANKRD33Q7Z3H0 272 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 CPXCR1Q8N123 301 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 ANKRD35Q8N283 1001 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 PCSK9Q8NBP7 692 aaKnown RBP9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 KIFC2Q96AC6 838 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 MAF1Q9H063 256 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 SPC25Q9HBM1 224 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 STXBP5LQ9Y2K9 1186 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 ELP1O95163 1332 aa9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 GREB1LQ9C091 1923 aaPredicted RBP9.23□□□□□ -0.93
PTCSC3-201ENST00000556013 TSPY2A6NKD2 308 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 TMEM232C9JQI7 657 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 KIAA0355O15063 1070 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 FGAP02671 866 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 ANO1Q5XXA6 986 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 CCSAPQ6IQ19 270 aaPredicted RBP9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 SMC5Q8IY18 1101 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 STK11IPQ8N1F8 1099 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 DEFB123Q8N688 67 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 FAM133AQ8N9E0 248 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 OTUD7AQ8TE49 926 aaPredicted RBP9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 ACAD9Q9H845 621 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 RAVER2Q9HCJ3 691 aaKnown RBP9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 IL17RBQ9NRM6 502 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 MTMR10Q9NXD2 777 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 ATP11BQ9Y2G3 1177 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 Q9Y3F1 56 aa9.22□□□□□ -0.93
PTCSC3-201ENST00000556013 ZMYM6O95789 1325 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms