RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PTGDRQ13258 359 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 CUL4BQ13620 913 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 ERFEQ4G0M1 354 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 CDKAL1Q5VV42 579 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 GPR161Q8N6U8 529 aaKnown RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 LRRN4CLQ8ND94 238 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 CERKQ8TCT0 537 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 CCDC12Q8WUD4 166 aaPredicted RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 ATP8A2Q9NTI2 1148 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 ZNF446Q9NWS9 450 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 FAM53CQ9NYF3 392 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 ARPP21Q9UBL0 812 aaPredicted RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 COL5A3P25940 1745 aaPredicted RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 A0A087X0B3 334 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 TSPY2A6NKD2 308 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 PNMA6AP0CW24 399 aaPredicted RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 NT5C2P49902 561 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 TRIM14Q14142 442 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 TERF2Q15554 542 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 EARS2Q5JPH6 523 aaKnown RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 TAF3Q5VWG9 929 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 JAKMIP3Q5VZ66 844 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 PIK3AP1Q6ZUJ8 805 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 FNBP4Q8N3X1 1017 aaPredicted RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 GOLGA1Q92805 767 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 FAM84BQ96KN1 310 aaPredicted RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 WDR24Q96S15 920 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 DESI2Q9BSY9 194 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 ANKRD2Q9GZV1 360 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 ADD3Q9UEY8 706 aaKnown RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 MINPP1Q9UNW1 487 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 CTNND2Q9UQB3 1225 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 MRFAP1Q9Y605 127 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 TAF1P21675 1872 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 ITIH6Q6UXX5 1313 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 MYH8P13535 1937 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 BAZ2BQ9UIF8 2168 aaKnown RBP7.91□□□□□ -1.14
TDP1-213ENST00000555880 SOWAHDA6NJG2 315 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 PPP1R3GB7ZBB8 358 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 N4BP3O15049 544 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 ATP8B1O43520 1251 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 MFAP3LO75121 409 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 MCM7P33993 719 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 LONP1P36776 959 aaKnown RBP7.91□□□□□ -1.14
TDP1-213ENST00000555880 TUBB4BP68371 445 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 MECOMQ03112 1051 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 RBL2Q08999 1139 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 PAK1Q13153 545 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 TUBB2AQ13885 445 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 KARSQ15046 597 aaKnown RBP7.91□□□□□ -1.14
TDP1-213ENST00000555880 PFKFB3Q16875 520 aaPredicted RBP7.91□□□□□ -1.14
TDP1-213ENST00000555880 TEX35Q5T0J7 233 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 RRAGBQ5VZM2 374 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 ARL6IP4Q66PJ3 421 aaKnown RBP7.91□□□□□ -1.14
TDP1-213ENST00000555880 SPTY2D1Q68D10 685 aaPredicted RBP7.91□□□□□ -1.14
TDP1-213ENST00000555880 AMOTL1Q8IY63 956 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 RASSF8Q8NHQ8 419 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 CPLX3Q8WVH0 158 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 RABGGTAQ92696 567 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 TNFRSF25Q93038 417 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 NSUN4Q96CB9 384 aaKnown RBP7.91□□□□□ -1.14
TDP1-213ENST00000555880 SHISA4Q96DD7 197 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 MED15Q96RN5 788 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 TUBB2BQ9BVA1 445 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 NYXQ9GZU5 481 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 KAT14Q9H8E8 782 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 LZTFL1Q9NQ48 299 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 SH3GLB2Q9NR46 395 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 RWDD2AQ9UIY3 292 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.91□□□□□ -1.14
TDP1-213ENST00000555880 FHOD1Q9Y613 1164 aa7.91□□□□□ -1.14
TDP1-213ENST00000555880 ZNF831Q5JPB2 1677 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 TEX33O43247 280 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 TBC1D12O60347 775 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 IGSF3O75054 1194 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 HIBADHP31937 336 aaKnown RBP7.9□□□□□ -1.14
TDP1-213ENST00000555880 STAT6P42226 847 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 PTGER2P43116 358 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 PSEN2P49810 448 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 SBK1Q52WX2 424 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 CCDC178Q5BJE1 867 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 FBXO33Q7Z6M2 555 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 DZIP1Q86YF9 867 aaKnown RBP7.9□□□□□ -1.14
TDP1-213ENST00000555880 TMTC1Q8IUR5 882 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 SMYD4Q8IYR2 804 aaPredicted RBP7.9□□□□□ -1.14
TDP1-213ENST00000555880 SRBD1Q8N5C6 995 aaKnown RBP7.9□□□□□ -1.14
TDP1-213ENST00000555880 KIFC2Q96AC6 838 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 ARFGAP3Q9NP61 516 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 DCP1AQ9NPI6 582 aaPredicted RBP7.9□□□□□ -1.14
TDP1-213ENST00000555880 TTF2Q9UNY4 1162 aaKnown RBP7.9□□□□□ -1.14
TDP1-213ENST00000555880 ADGRG1Q9Y653 693 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 NRAPQ86VF7 1730 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 COL4A1P02462 1669 aa7.9□□□□□ -1.14
TDP1-213ENST00000555880 KIAA1551Q9HCM1 1747 aa7.9□□□□□ -1.15
TDP1-213ENST00000555880 CCDC194A0A1B0GVG4 234 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 CCDC66A2RUB6 948 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 CTAGE9A4FU28 777 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 SMIM22K7EJ46 135 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 ARHGAP33O14559 1287 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 FANCGO15287 622 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms