RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 LRRC37A2A6NM11 1700 aa16.33■□□□□ 0.21
SDR39U1-214ENST00000555778 SLC3A2P08195 630 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 ATN1P54259 1190 aaPredicted RBP16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 HAND2P61296 217 aa16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 RRP12Q5JTH9 1297 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 OLFML2BQ68BL8 750 aa16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 RIOX2Q8IUF8 465 aa16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 SMC5Q8IY18 1101 aa16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 RWDD1Q9H446 243 aaPredicted RBP16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 HOMER2Q9NSB8 354 aa16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 STX8Q9UNK0 236 aa16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 RIPK3Q9Y572 518 aa16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 SUPT16HQ9Y5B9 1047 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-214ENST00000555778 STRNO43815 780 aa16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 RANBP6O60518 1105 aaKnown RBP16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 SLC25A27O95847 323 aa16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 COL6A1P12109 1028 aa16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 IKQ13123 557 aaPredicted RBP16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 KCTD2Q14681 263 aa16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 GJC2Q5T442 439 aaPredicted RBP16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 SLFN13Q68D06 897 aa16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 TEX13BQ9BXU2 312 aa16.32■□□□□ 0.2
SDR39U1-214ENST00000555778 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 IGHA2P01877 340 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 SNAP25P60880 206 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 NUCB1Q02818 461 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 PLEKHM2Q8IWE5 1019 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 ABRAQ8N0Z2 381 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 SENP6Q9GZR1 1112 aaPredicted RBP16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 HELLSQ9NRZ9 838 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 CTDP1Q9Y5B0 961 aaPredicted RBP16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 LCTP09848 1927 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 LTBP2Q14767 1821 aa16.31■□□□□ 0.2
SDR39U1-214ENST00000555778 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 BMP3P12645 472 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 MCCP23508 829 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 MCMDC2Q4G0Z9 681 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 KCTD1Q719H9 257 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 TBC1D10CQ8IV04 446 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 PRO3102Q9H379 93 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 IL17RBQ9NRM6 502 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 SLC5A4Q9NY91 659 aa16.3■□□□□ 0.2
SDR39U1-214ENST00000555778 SMCHD1A6NHR9 2005 aa16.29■□□□□ 0.2
SDR39U1-214ENST00000555778 NEDD4P46934 1319 aa16.29■□□□□ 0.2
SDR39U1-214ENST00000555778 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-214ENST00000555778 SLC1A4P43007 532 aa16.29■□□□□ 0.2
SDR39U1-214ENST00000555778 CCDC174Q6PII3 467 aa16.29■□□□□ 0.2
SDR39U1-214ENST00000555778 PRPF38AQ8NAV1 312 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-214ENST00000555778 SLC38A10Q9HBR0 1119 aa16.29■□□□□ 0.2
SDR39U1-214ENST00000555778 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
SDR39U1-214ENST00000555778 SEPT4O43236 478 aa16.28■□□□□ 0.2
SDR39U1-214ENST00000555778 MSCO60682 206 aa16.28■□□□□ 0.2
SDR39U1-214ENST00000555778 ZBED4O75132 1171 aa16.28■□□□□ 0.2
SDR39U1-214ENST00000555778 FGAP02671 866 aa16.28■□□□□ 0.2
SDR39U1-214ENST00000555778 CAPN2P17655 700 aa16.28■□□□□ 0.2
SDR39U1-214ENST00000555778 MAGEA10P43363 369 aaPredicted RBP16.28■□□□□ 0.2
SDR39U1-214ENST00000555778 STAT2P52630 851 aa16.28■□□□□ 0.2
SDR39U1-214ENST00000555778 ZNF792Q3KQV3 632 aa16.28■□□□□ 0.2
SDR39U1-214ENST00000555778 MKL1Q969V6 931 aa16.28■□□□□ 0.2
SDR39U1-214ENST00000555778 FRMPD2Q68DX3 1309 aaPredicted RBP16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 KBTBD13C9JR72 458 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 DNM1LO00429 736 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 SOX1O00570 391 aaPredicted RBP16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 SDSP20132 328 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 COPB2P35606 906 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 AAMPQ13685 434 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 FERMT2Q96AC1 680 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 DDX11Q96FC9 970 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 AGBL1Q96MI9 1066 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 TINF2Q9BSI4 451 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 ANAPC4Q9UJX5 808 aa16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 DDX49Q9Y6V7 483 aaKnown RBP16.27■□□□□ 0.2
SDR39U1-214ENST00000555778 PGK1P00558 417 aa16.26■□□□□ 0.19
SDR39U1-214ENST00000555778 MDM2Q00987 491 aaPredicted RBP16.26■□□□□ 0.19
SDR39U1-214ENST00000555778 LRCH3Q96II8 777 aa16.26■□□□□ 0.19
SDR39U1-214ENST00000555778 FGD4Q96M96 766 aa16.26■□□□□ 0.19
SDR39U1-214ENST00000555778 XPNPEP3Q9NQH7 507 aa16.26■□□□□ 0.19
SDR39U1-214ENST00000555778 ATP11BQ9Y2G3 1177 aa16.26■□□□□ 0.19
SDR39U1-214ENST00000555778 ZNF536O15090 1300 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 ZMYM6O95789 1325 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 LAMA2P24043 3122 aaKnown RBP16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 ORC4O43929 436 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 PDE4AP27815 886 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 SLC16A2P36021 539 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 RTP1P59025 263 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 LRRC41Q15345 812 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 ALX1Q15699 326 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 ZKSCAN3Q9BRR0 538 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 IL25Q9H293 177 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 RNF146Q9NTX7 359 aa16.25■□□□□ 0.19
SDR39U1-214ENST00000555778 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms