RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ROBO3Q96MS0 1386 aa13.01□□□□□ -0.33
TDP1-212ENST00000555565 SYNGAP1Q96PV0 1343 aa13□□□□□ -0.33
TDP1-212ENST00000555565 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
TDP1-212ENST00000555565 ACLYP53396 1101 aa13□□□□□ -0.33
TDP1-212ENST00000555565 TMEM132BQ14DG7 1078 aa13□□□□□ -0.33
TDP1-212ENST00000555565 ZNF792Q3KQV3 632 aa13□□□□□ -0.33
TDP1-212ENST00000555565 C12orf60Q5U649 245 aa13□□□□□ -0.33
TDP1-212ENST00000555565 NCAPG2Q86XI2 1143 aa13□□□□□ -0.33
TDP1-212ENST00000555565 MB21D1Q8N884 522 aa13□□□□□ -0.33
TDP1-212ENST00000555565 ATG4CQ96DT6 458 aa13□□□□□ -0.33
TDP1-212ENST00000555565 TINF2Q9BSI4 451 aa13□□□□□ -0.33
TDP1-212ENST00000555565 PUS7LQ9H0K6 701 aaKnown RBP13□□□□□ -0.33
TDP1-212ENST00000555565 ECHDC1Q9NTX5 307 aa13□□□□□ -0.33
TDP1-212ENST00000555565 SLC5A4Q9NY91 659 aa13□□□□□ -0.33
TDP1-212ENST00000555565 DCDC2CA8MYV0 355 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 USP17L12C9JPN9 530 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 USP17L21D6R901 530 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 PGK2P07205 417 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 FCER1AP12319 257 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 ZSCAN25Q6NSZ9 544 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 TMEM179Q6ZVK1 233 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 CLEC10AQ8IUN9 316 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 TANGO6Q9C0B7 1094 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 DIS3Q9Y2L1 958 aaKnown RBP12.99□□□□□ -0.33
TDP1-212ENST00000555565 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
TDP1-212ENST00000555565 PLXNA1Q9UIW2 1896 aa12.99□□□□□ -0.33
TDP1-212ENST00000555565 SYNRGQ9UMZ2 1314 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 MYADML2A6NDP7 307 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 AKR1B1P15121 316 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 CSF2RAP15509 400 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 CDK8P49336 464 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 IRX5P78411 483 aaPredicted RBP12.98□□□□□ -0.33
TDP1-212ENST00000555565 PLS1Q14651 629 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 ZNF365Q70YC5 407 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 STARD7Q9NQZ5 370 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 CXXC1Q9P0U4 656 aaPredicted RBP12.98□□□□□ -0.33
TDP1-212ENST00000555565 PCDHB15Q9Y5E8 787 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 SLC4A4Q9Y6R1 1079 aa12.98□□□□□ -0.33
TDP1-212ENST00000555565 ACRP10323 421 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 AKR1A1P14550 325 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 PPIGQ13427 754 aaKnown RBP eCLIP12.97□□□□□ -0.33
TDP1-212ENST00000555565 KCNA10Q16322 511 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 CTR9Q6PD62 1173 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 CCDC129Q6ZRS4 1044 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 C16orf86Q6ZW13 317 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 NUP133Q8WUM0 1156 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 CCDC17Q96LX7 622 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 STRBPQ96SI9 672 aaKnown RBP12.97□□□□□ -0.33
TDP1-212ENST00000555565 C1QTNF1Q9BXJ1 281 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 YBX2Q9Y2T7 364 aaKnown RBP12.97□□□□□ -0.33
TDP1-212ENST00000555565 TMX2Q9Y320 296 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 ZNFX1Q9P2E3 1918 aaKnown RBP12.97□□□□□ -0.33
TDP1-212ENST00000555565 MYO9BQ13459 2157 aa12.97□□□□□ -0.33
TDP1-212ENST00000555565 ELP1O95163 1332 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 ADCY6O43306 1168 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 FLOT1O75955 427 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 SLC25A27O95847 323 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.33
TDP1-212ENST00000555565 IGFBP4P22692 258 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 TFF2Q03403 129 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 ICA1Q05084 483 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 RIOX2Q8IUF8 465 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 SPICE1Q8N0Z3 855 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 REPS2Q8NFH8 660 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 HERVK_113Q902F9 699 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 OSBP2Q969R2 916 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 DDRGK1Q96HY6 314 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 GPATCH3Q96I76 525 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 MMP19Q99542 508 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 LRFN3Q9BTN0 628 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.33
TDP1-212ENST00000555565 GSG1L2A8MUP6 293 aa12.95□□□□□ -0.34
TDP1-212ENST00000555565 CST5P28325 142 aaPredicted RBP12.95□□□□□ -0.34
TDP1-212ENST00000555565 KCNQ1P51787 676 aa12.95□□□□□ -0.34
TDP1-212ENST00000555565 FAM126BQ8IXS8 530 aa12.95□□□□□ -0.34
TDP1-212ENST00000555565 APPBP2Q92624 585 aa12.95□□□□□ -0.34
TDP1-212ENST00000555565 VWCEQ96DN2 955 aa12.95□□□□□ -0.34
TDP1-212ENST00000555565 NKX2-4Q9H2Z4 354 aa12.95□□□□□ -0.34
TDP1-212ENST00000555565 VCPKMTQ9H867 229 aa12.95□□□□□ -0.34
TDP1-212ENST00000555565 ARHGEF10LQ9HCE6 1279 aa12.95□□□□□ -0.34
TDP1-212ENST00000555565 ARPP21Q9UBL0 812 aaPredicted RBP12.95□□□□□ -0.34
TDP1-212ENST00000555565 ZNF214Q9UL59 606 aaPredicted RBP12.95□□□□□ -0.34
TDP1-212ENST00000555565 PARP14Q460N5 1801 aa12.95□□□□□ -0.34
TDP1-212ENST00000555565 TCF20Q9UGU0 1960 aaKnown RBP12.94□□□□□ -0.34
TDP1-212ENST00000555565 CTAGE5O15320 804 aa12.94□□□□□ -0.34
TDP1-212ENST00000555565 RNF113AO15541 343 aaKnown RBP12.94□□□□□ -0.34
TDP1-212ENST00000555565 CD4P01730 458 aa12.94□□□□□ -0.34
TDP1-212ENST00000555565 EEF2P13639 858 aaKnown RBP12.94□□□□□ -0.34
TDP1-212ENST00000555565 RAB30Q15771 203 aa12.94□□□□□ -0.34
TDP1-212ENST00000555565 SBK1Q52WX2 424 aa12.94□□□□□ -0.34
TDP1-212ENST00000555565 PSRC1Q6PGN9 363 aaPredicted RBP12.94□□□□□ -0.34
TDP1-212ENST00000555565 MAMDC4Q6UXC1 1216 aa12.94□□□□□ -0.34
TDP1-212ENST00000555565 TMEM199Q8N511 208 aa12.94□□□□□ -0.34
TDP1-212ENST00000555565 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
TDP1-212ENST00000555565 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.94□□□□□ -0.34
TDP1-212ENST00000555565 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms