RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 PCDHA8Q9Y5H6 950 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
IFT43-209ENST00000555305 SMCO2A6NFE2 343 aa16.55■□□□□ 0.24
IFT43-209ENST00000555305 LONP1P36776 959 aaKnown RBP16.55■□□□□ 0.24
IFT43-209ENST00000555305 NLRP12P59046 1061 aa16.55■□□□□ 0.24
IFT43-209ENST00000555305 PTGDRQ13258 359 aa16.55■□□□□ 0.24
IFT43-209ENST00000555305 SLC35G1Q2M3R5 365 aa16.55■□□□□ 0.24
IFT43-209ENST00000555305 SPDYE2Q495Y8 402 aa16.55■□□□□ 0.24
IFT43-209ENST00000555305 EARS2Q5JPH6 523 aaKnown RBP16.55■□□□□ 0.24
IFT43-209ENST00000555305 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
IFT43-209ENST00000555305 ZSCAN30Q86W11 494 aa16.55■□□□□ 0.24
IFT43-209ENST00000555305 CSRNP2Q9H175 543 aa16.55■□□□□ 0.24
IFT43-209ENST00000555305 ESPNB1AK53 854 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 PTMAP06454 111 aaKnown RBP16.54■□□□□ 0.24
IFT43-209ENST00000555305 TXLNAP40222 546 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 PRPHP41219 470 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 ICA1Q05084 483 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 NONOQ15233 471 aaKnown RBP eCLIP16.54■□□□□ 0.24
IFT43-209ENST00000555305 ZNF174Q15697 407 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 CIAPIN1Q6FI81 312 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
IFT43-209ENST00000555305 LUZP1Q86V48 1076 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 TRIML1Q8N9V2 468 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 PIGSQ96S52 555 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 ZNF70Q9UC06 446 aaPredicted RBP16.54■□□□□ 0.24
IFT43-209ENST00000555305 SMTNL1A8MU46 457 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 TBC1D12O60347 775 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 TRAF1Q13077 416 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 CCDC96Q2M329 555 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 REXO1Q8N1G1 1221 aaKnown RBP16.54■□□□□ 0.24
IFT43-209ENST00000555305 GMCL1Q96IK5 515 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 DACH1Q9UI36 760 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 PCDHAC2Q9Y5I4 1007 aa16.54■□□□□ 0.24
IFT43-209ENST00000555305 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 ZBTB5O15062 677 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 SMC2O95347 1197 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
IFT43-209ENST00000555305 MSNP26038 577 aaKnown RBP16.53■□□□□ 0.24
IFT43-209ENST00000555305 SLC1A4P43007 532 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 TNNI2P48788 182 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 EIF6P56537 245 aaKnown RBP16.53■□□□□ 0.24
IFT43-209ENST00000555305 ATP2B2Q01814 1243 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 IQCB1Q15051 598 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 LONRF3Q496Y0 759 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 TYW1BQ6NUM6 668 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 SARM1Q6SZW1 724 aa16.53■□□□□ 0.24
IFT43-209ENST00000555305 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.53■□□□□ 0.24
IFT43-209ENST00000555305 FRMPD2Q68DX3 1309 aaPredicted RBP16.53■□□□□ 0.24
IFT43-209ENST00000555305 POLR2DO15514 142 aaKnown RBP16.52■□□□□ 0.24
IFT43-209ENST00000555305 VEGFAP15692 232 aaPredicted RBP16.52■□□□□ 0.24
IFT43-209ENST00000555305 MCM7P33993 719 aa16.52■□□□□ 0.24
IFT43-209ENST00000555305 ADCY7P51828 1080 aa16.52■□□□□ 0.24
IFT43-209ENST00000555305 POSTNQ15063 836 aa16.52■□□□□ 0.24
IFT43-209ENST00000555305 CT47A1Q5JQC4 288 aaPredicted RBP16.52■□□□□ 0.24
IFT43-209ENST00000555305 NT5DC1Q5TFE4 455 aa16.52■□□□□ 0.24
IFT43-209ENST00000555305 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
IFT43-209ENST00000555305 MTMR8Q96EF0 704 aa16.52■□□□□ 0.24
IFT43-209ENST00000555305 NAP1L4Q99733 375 aaKnown RBP16.52■□□□□ 0.24
IFT43-209ENST00000555305 VAT1LQ9HCJ6 419 aa16.52■□□□□ 0.24
IFT43-209ENST00000555305 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
IFT43-209ENST00000555305 SLFN14P0C7P3 912 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 MRPL12P52815 198 aaKnown RBP16.51■□□□□ 0.23
IFT43-209ENST00000555305 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 CXCL9Q07325 125 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 NEK8Q86SG6 692 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 IQUBQ8NA54 791 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 AK8Q96MA6 479 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 UBA5Q9GZZ9 404 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 JMJD4Q9H9V9 463 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 ARHGEF10LQ9HCE6 1279 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 GPCPD1Q9NPB8 672 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 VWA3AA6NCI4 1184 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 IKBKBO14920 756 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 TNFAIP1Q13829 316 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 DTHD1Q6ZMT9 781 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 C11orf57Q6ZUT1 292 aaPredicted RBP16.51■□□□□ 0.23
IFT43-209ENST00000555305 SH2D4AQ9H788 454 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 SIPA1L1O43166 1804 aa16.51■□□□□ 0.23
IFT43-209ENST00000555305 TCP10L2B9ZVM9 353 aa16.5■□□□□ 0.23
IFT43-209ENST00000555305 CDC25BP30305 580 aa16.5■□□□□ 0.23
IFT43-209ENST00000555305 MDM2Q00987 491 aaPredicted RBP16.5■□□□□ 0.23
IFT43-209ENST00000555305 SEPT2Q15019 361 aa16.5■□□□□ 0.23
IFT43-209ENST00000555305 SYMPKQ92797 1274 aaKnown RBP16.5■□□□□ 0.23
IFT43-209ENST00000555305 CUL5Q93034 780 aa16.5■□□□□ 0.23
IFT43-209ENST00000555305 ZBED3Q96IU2 234 aaPredicted RBP16.5■□□□□ 0.23
IFT43-209ENST00000555305 ACTN4O43707 911 aaKnown RBP16.49■□□□□ 0.23
IFT43-209ENST00000555305 GRIN1Q05586 938 aa16.49■□□□□ 0.23
IFT43-209ENST00000555305 SEMA3FQ13275 785 aa16.49■□□□□ 0.23
IFT43-209ENST00000555305 INF2Q27J81 1249 aa16.49■□□□□ 0.23
IFT43-209ENST00000555305 SPECC1Q5M775 1068 aa16.49■□□□□ 0.23
IFT43-209ENST00000555305 C4orf32Q8N8J7 132 aa16.49■□□□□ 0.23
IFT43-209ENST00000555305 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
IFT43-209ENST00000555305 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
IFT43-209ENST00000555305 COL4A5P29400 1685 aa16.49■□□□□ 0.23
IFT43-209ENST00000555305 F5H6K3 240 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms