RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 CLIP2Q9UDT6 1046 aa9.94□□□□□ -0.82
TRIM9-204ENST00000555170 ZNF236Q9UL36 1845 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 WDR46O15213 610 aaKnown RBP9.93□□□□□ -0.82
TRIM9-204ENST00000555170 RAD21O60216 631 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 CDC45O75419 566 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 TTLL1O95922 423 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 HMGCRP04035 888 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 CYP21A2P08686 494 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 GCLCP48506 637 aaPredicted RBP9.93□□□□□ -0.82
TRIM9-204ENST00000555170 NOVP48745 357 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
TRIM9-204ENST00000555170 FAM83BQ5T0W9 1011 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 MFSD6Q6ZSS7 791 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 USP38Q8NB14 1042 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 LPAR1Q92633 364 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 MKL1Q969V6 931 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 LBHD1Q9BQE6 289 aaPredicted RBP9.93□□□□□ -0.82
TRIM9-204ENST00000555170 PAGR1Q9BTK6 254 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 GOPCQ9HD26 462 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 FBXO28Q9NVF7 368 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 BTBD7Q9P203 1132 aa9.93□□□□□ -0.82
TRIM9-204ENST00000555170 BDP1A6H8Y1 2624 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 B4E1Z4 1266 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 F5H6K3 240 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 KDM4AO75164 1064 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 PCP11498 1178 aaKnown RBP9.92□□□□□ -0.82
TRIM9-204ENST00000555170 ERVK-9P63128 1117 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 ERVK-24P63145 666 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 KLRC3Q07444 240 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 SHHQ15465 462 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 Q3C1V9 767 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 LBX2Q6XYB7 198 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 STOX1Q6ZVD7 989 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 GMCL1P1Q8NEA9 526 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 MAP4K1Q92918 833 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 CHMP4CQ96CF2 233 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 ATG4CQ96DT6 458 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 ZKSCAN3Q9BRR0 538 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 PORCNQ9H237 461 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
TRIM9-204ENST00000555170 CTNNA3Q9UI47 895 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 GJD2Q9UKL4 321 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 STX8Q9UNK0 236 aa9.92□□□□□ -0.82
TRIM9-204ENST00000555170 RBM8AQ9Y5S9 174 aaKnown RBP9.92□□□□□ -0.82
TRIM9-204ENST00000555170 U3KPZ7 1027 aaPredicted RBP9.92□□□□□ -0.82
TRIM9-204ENST00000555170 FLOT1O75955 427 aa9.91□□□□□ -0.82
TRIM9-204ENST00000555170 DSG3P32926 999 aa9.91□□□□□ -0.82
TRIM9-204ENST00000555170 COL9A3Q14050 684 aaPredicted RBP9.91□□□□□ -0.82
TRIM9-204ENST00000555170 C9orf50Q5SZB4 431 aa9.91□□□□□ -0.82
TRIM9-204ENST00000555170 RCSD1Q6JBY9 416 aa9.91□□□□□ -0.82
TRIM9-204ENST00000555170 SAMD1Q6SPF0 538 aaPredicted RBP9.91□□□□□ -0.82
TRIM9-204ENST00000555170 GTF3C2Q8WUA4 911 aaPredicted RBP9.91□□□□□ -0.82
TRIM9-204ENST00000555170 ANO2Q9NQ90 1003 aa9.91□□□□□ -0.82
TRIM9-204ENST00000555170 TCP11L1Q9NUJ3 509 aa9.91□□□□□ -0.82
TRIM9-204ENST00000555170 SYNPO2Q9UMS6 1093 aa9.91□□□□□ -0.82
TRIM9-204ENST00000555170 DNAH12Q6ZR08 3092 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 PLXNA1Q9UIW2 1896 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 COG2Q14746 738 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 SLFN13Q68D06 897 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 CYB5R4Q7L1T6 521 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 REPS2Q8NFH8 660 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 GPRC5AQ8NFJ5 357 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 ESR2Q92731 530 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 TMEM47Q9BQJ4 181 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 PPP1R9AQ9ULJ8 1098 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 MTMR7Q9Y216 660 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 RABGAP1Q9Y3P9 1069 aa9.9□□□□□ -0.82
TRIM9-204ENST00000555170 LCTP09848 1927 aa9.9□□□□□ -0.83
TRIM9-204ENST00000555170 ZNFX1Q9P2E3 1918 aaKnown RBP9.9□□□□□ -0.83
TRIM9-204ENST00000555170 FRMPD3Q5JV73 1810 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 TNKSO95271 1327 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 E7EWF7 191 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 MCCP23508 829 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 TMEM132BQ14DG7 1078 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 MAP3K21Q5TCX8 1036 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 LHX8Q68G74 356 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 ENAHQ8N8S7 591 aaPredicted RBP9.89□□□□□ -0.83
TRIM9-204ENST00000555170 TRIB2Q92519 343 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 GMCL1Q96IK5 515 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 SLF1Q9BQI6 1058 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 ZSWIM5Q9P217 1185 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 ADAMTS5Q9UNA0 930 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 SMCHD1A6NHR9 2005 aa9.89□□□□□ -0.83
TRIM9-204ENST00000555170 FRMPD2Q68DX3 1309 aaPredicted RBP9.88□□□□□ -0.83
TRIM9-204ENST00000555170 SYNGAP1Q96PV0 1343 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 VWA5AO00534 786 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 SLC27A2O14975 620 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 TOP1P11387 765 aaKnown RBP9.88□□□□□ -0.83
TRIM9-204ENST00000555170 BMP3P12645 472 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 PRKAR2AP13861 404 aaKnown RBP9.88□□□□□ -0.83
TRIM9-204ENST00000555170 CYP2B6P20813 491 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 SLC1A4P43007 532 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 ANTXR2P58335 489 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 SMAD3P84022 425 aaKnown RBP9.88□□□□□ -0.83
TRIM9-204ENST00000555170 GRIN2CQ14957 1233 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 NECTIN1Q15223 517 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 CREB3L3Q68CJ9 461 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 KIAA1211Q6ZU35 1233 aa9.88□□□□□ -0.83
TRIM9-204ENST00000555170 KCTD1Q719H9 257 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms