RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 LGR6Q9HBX8 967 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 PCDHB12Q9Y5F1 795 aa7.5□□□□□ -1.21
PSEN1-211ENST00000554995 SART1O43290 800 aaKnown RBP7.49□□□□□ -1.21
PSEN1-211ENST00000554995 GAS2O43903 313 aaKnown RBP7.49□□□□□ -1.21
PSEN1-211ENST00000554995 DLX3O60479 287 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 DNAJC8O75937 253 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-211ENST00000554995 KCNH1O95259 989 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 ETV3P41162 512 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 MAP7Q14244 749 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 GRIK4Q16099 956 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 NBPF9Q3BBW0 867 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 NOL9Q5SY16 702 aaKnown RBP7.49□□□□□ -1.21
PSEN1-211ENST00000554995 SLC7A14Q8TBB6 771 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 BRF1Q92994 677 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 PRDM14Q9GZV8 571 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 SEMA6CQ9H3T2 930 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 AKTIPQ9H8T0 292 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 TRIM39Q9HCM9 518 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 NDOR1Q9UHB4 597 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 MCM8Q9UJA3 840 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 FHOD1Q9Y613 1164 aa7.49□□□□□ -1.21
PSEN1-211ENST00000554995 DYNC1LI2O43237 492 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-211ENST00000554995 NFICP08651 508 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 PPP2R5DQ14738 602 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 SF1Q15637 639 aaKnown RBP7.48□□□□□ -1.21
PSEN1-211ENST00000554995 GTF2IRD2BQ6EKJ0 949 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 Q6ZS46 218 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 GTF2IRD2Q86UP8 949 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 AFAP1L2Q8N4X5 818 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 SYTL5Q8TDW5 730 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-211ENST00000554995 FBLIM1Q8WUP2 373 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 CEP41Q9BYV8 373 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 NOL6Q9H6R4 1146 aaKnown RBP7.48□□□□□ -1.21
PSEN1-211ENST00000554995 SLC52A2Q9HAB3 445 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 PRDM10Q9NQV6 1147 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 CHPF2Q9P2E5 772 aa7.48□□□□□ -1.21
PSEN1-211ENST00000554995 FAM83GA6ND36 823 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 RBAK-RBAKDNI3L0D1 243 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 LRRN2O75325 713 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 GLB1P16278 677 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 ITGB7P26010 798 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 GABREP78334 506 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 SNW1Q13573 536 aaKnown RBP7.47□□□□□ -1.21
PSEN1-211ENST00000554995 SGO2Q562F6 1265 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 BRDTQ58F21 947 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-211ENST00000554995 ODR4Q5SWX8 454 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 BRAPQ7Z569 592 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 FIBCD1Q8N539 461 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 GSTCDQ8NEC7 633 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 JDP2Q8WYK2 163 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 DDX1Q92499 740 aaKnown RBP7.47□□□□□ -1.21
PSEN1-211ENST00000554995 CEP89Q96ST8 783 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 YIPF2Q9BWQ6 316 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 USP21Q9UK80 565 aa7.47□□□□□ -1.21
PSEN1-211ENST00000554995 DIS3Q9Y2L1 958 aaKnown RBP7.47□□□□□ -1.21
PSEN1-211ENST00000554995 BLACEA4D250 179 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 GFRA1P56159 465 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 EXOSC10Q01780 885 aaKnown RBP7.46□□□□□ -1.22
PSEN1-211ENST00000554995 MAP4K2Q12851 820 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 GRB10Q13322 594 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 FAM50AQ14320 339 aaKnown RBP7.46□□□□□ -1.22
PSEN1-211ENST00000554995 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-211ENST00000554995 FGD2Q7Z6J4 655 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 KCTD13Q8WZ19 329 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 EZH1Q92800 747 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-211ENST00000554995 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.22
PSEN1-211ENST00000554995 UBL7Q96S82 380 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-211ENST00000554995 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 NKX2-4Q9H2Z4 354 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 GFOD1Q9NXC2 390 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 PRR13Q9NZ81 148 aa7.46□□□□□ -1.22
PSEN1-211ENST00000554995 NOP53Q9NZM5 478 aaKnown RBP7.46□□□□□ -1.22
PSEN1-211ENST00000554995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-211ENST00000554995 ALG1L2C9J202 215 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 EFCAB14O75071 495 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 SNRPB2P08579 225 aaKnown RBP7.45□□□□□ -1.22
PSEN1-211ENST00000554995 PMLP29590 882 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 HOXC12P31275 282 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 KCNJ6P48051 423 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 CDK5R2Q13319 367 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 NTRK3Q16288 839 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 CCDC181Q5TID7 509 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 SEZ6L2Q6UXD5 910 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 STRA8Q7Z7C7 330 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 PPM1KQ8N3J5 372 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 TOP6BLQ8N6T0 577 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 TMEM145Q8NBT3 493 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 ATL2Q8NHH9 583 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 LEO1Q8WVC0 666 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-211ENST00000554995 LENG1Q96BZ8 264 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-211ENST00000554995 CCDC140Q96MF4 163 aa7.45□□□□□ -1.22
PSEN1-211ENST00000554995 TNPO3Q9Y5L0 923 aaKnown RBP7.45□□□□□ -1.22
PSEN1-211ENST00000554995 OPA1O60313 960 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 VAMP4O75379 141 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 EOMESO95936 686 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 ZNF460Q14592 562 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 WWC2Q6AWC2 1192 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 DDX46Q7L014 1031 aaKnown RBP7.44□□□□□ -1.22
PSEN1-211ENST00000554995 TMC3Q7Z5M5 1100 aa7.44□□□□□ -1.22
PSEN1-211ENST00000554995 AHI1Q8N157 1196 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms