RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 RNF180Q86T96 592 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 BADQ92934 168 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 FERMT2Q96AC1 680 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 GUCD1Q96NT3 240 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 LRRCC1Q9C099 1032 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 PUS7LQ9H0K6 701 aaKnown RBP11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 PDLIM7Q9NR12 457 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 FBXO28Q9NVF7 368 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ARPP21Q9UBL0 812 aaPredicted RBP11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 PHF24Q9UPV7 400 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 GREB1LQ9C091 1923 aaPredicted RBP11.27□□□□□ -0.61
SRP54-AS1-201ENST00000554945 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 RAD21O60216 631 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 CHGBP05060 677 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 SBK1Q52WX2 424 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 FAM83BQ5T0W9 1011 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 GIMAP6Q6P9H5 292 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 SH3RF1Q7Z6J0 888 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 REPS2Q8NFH8 660 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 TRIM43Q96BQ3 446 aaPredicted RBP11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 FAM161BQ96MY7 647 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 MKNK2Q9HBH9 465 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ZNF214Q9UL59 606 aaPredicted RBP11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 CNPY2Q9Y2B0 182 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 MYH4Q9Y623 1939 aa11.26□□□□□ -0.61
SRP54-AS1-201ENST00000554945 EYSQ5T1H1 3165 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 PGK1P00558 417 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 CLTBP09497 229 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ZNF865P0CJ78 1059 aaPredicted RBP11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 AKR1A1P14550 325 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 SMAD3P84022 425 aaKnown RBP11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 TLE2Q04725 743 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 PRPF38AQ8NAV1 312 aaKnown RBP11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 STRBPQ96SI9 672 aaKnown RBP11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 TSEN34Q9BSV6 310 aaKnown RBP11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 SEMA6BQ9H3T3 888 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 NYAP2Q9P242 653 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ROBO3Q96MS0 1386 aa11.25□□□□□ -0.61
SRP54-AS1-201ENST00000554945 A0A1W2PQ45 241 aaPredicted RBP11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 A0A1W2PQY0 241 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 GSG1L2A8MUP6 293 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 F5H6K3 240 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 TAL1P17542 331 aaPredicted RBP11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 RASA1P20936 1047 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 KLRC3Q07444 240 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 NUP133Q8WUM0 1156 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 DDX11Q96FC9 970 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 SLF1Q9BQI6 1058 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 TEX13BQ9BXU2 312 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ECHDC1Q9NTX5 307 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 FAM184BQ9ULE4 1060 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 SYNGAP1Q96PV0 1343 aa11.24□□□□□ -0.61
SRP54-AS1-201ENST00000554945 MOXD2PA6NHM9 499 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 MINDY4BA8MYZ0 360 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ATP2A1O14983 1001 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 KIAA0355O15063 1070 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 SMARCA5O60264 1052 aaPredicted RBP11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ZBED4O75132 1171 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ADAMTS4O75173 837 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ZFYP08048 801 aaPredicted RBP11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 RAG1P15918 1043 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 GNAT2P19087 354 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 SNRNP48Q6IEG0 339 aaKnown RBP11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 MAMDC4Q6UXC1 1216 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ZNF467Q7Z7K2 595 aaPredicted RBP11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ZNF444Q8N0Y2 327 aaPredicted RBP11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 KBTBD3Q8NAB2 608 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 APPBP2Q92624 585 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 MKL1Q969V6 931 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 TOX2Q96NM4 488 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 CDX2Q99626 313 aaPredicted RBP11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 COL25A1Q9BXS0 654 aaPredicted RBP11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 TMEM39AQ9NV64 488 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 CLIP2Q9UDT6 1046 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 CTDP1Q9Y5B0 961 aaPredicted RBP11.23□□□□□ -0.61
SRP54-AS1-201ENST00000554945 CDH23Q9H251 3354 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 DNAJC25-GNG10A0A024R161 153 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 DCDC2CA8MYV0 355 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 PQBP1O60828 265 aaKnown RBP11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 DUSP11O75319 330 aaKnown RBP11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 SNAI1O95863 264 aaPredicted RBP11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 NDUFB10O96000 172 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ITGB8P26012 769 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ACLYP53396 1101 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 ANKRD33Q7Z3H0 272 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 STK11IPQ8N1F8 1099 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 KLHDC9Q8NEP7 349 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
SRP54-AS1-201ENST00000554945 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms