RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 GOLGA8HP0CJ92 632 aa19.12■□□□□ 0.65
SPTLC2-203ENST00000554901 RXRAP19793 462 aa19.12■□□□□ 0.65
SPTLC2-203ENST00000554901 DSG3P32926 999 aa19.12■□□□□ 0.65
SPTLC2-203ENST00000554901 SYDE2Q5VT97 1194 aa19.12■□□□□ 0.65
SPTLC2-203ENST00000554901 TMTC3Q6ZXV5 915 aa19.12■□□□□ 0.65
SPTLC2-203ENST00000554901 STAG2Q8N3U4 1231 aa19.12■□□□□ 0.65
SPTLC2-203ENST00000554901 MB21D1Q8N884 522 aa19.12■□□□□ 0.65
SPTLC2-203ENST00000554901 SPZ1Q9BXG8 430 aa19.12■□□□□ 0.65
SPTLC2-203ENST00000554901 GCLCP48506 637 aaPredicted RBP19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 MAP2K1Q02750 393 aaPredicted RBP19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 ME3Q16798 604 aa19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 CPLX2Q6PUV4 134 aaKnown RBP19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 CCDC144CPQ8IYA2 1237 aa19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 LARP6Q9BRS8 491 aaKnown RBP19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 CFHR5Q9BXR6 569 aa19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 RIOX1Q9H6W3 641 aa19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 FAM217BQ9NTX9 383 aaPredicted RBP19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 FBXO28Q9NVF7 368 aa19.11■□□□□ 0.65
SPTLC2-203ENST00000554901 SPDYE16A6NNV3 312 aaPredicted RBP19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 CA12O43570 354 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 HERVK_113P62684 666 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 TAF1CQ15572 869 aaPredicted RBP19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 TTBK2Q6IQ55 1244 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 NOL8Q76FK4 1167 aaKnown RBP19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 RAB11FIP4Q86YS3 637 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 SMCR8Q8TEV9 937 aaPredicted RBP19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 P2RX7Q99572 595 aaKnown RBP19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 ZFYVE28Q9HCC9 887 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 PNMA2Q9UL42 364 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 PRR12Q9ULL5 1215 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 CD2BP2O95400 341 aaKnown RBP19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 CDC27P30260 824 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 ADD1P35611 737 aaKnown RBP19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 CCT2P78371 535 aaKnown RBP19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 GTF3C6Q969F1 213 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 KIFC2Q96AC6 838 aa19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 RBM27Q9P2N5 1060 aaKnown RBP19.1■□□□□ 0.65
SPTLC2-203ENST00000554901 VWA5AO00534 786 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 CPLX1O14810 134 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 ZBED4O75132 1171 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 CDKL5O76039 1030 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 SLC16A2P36021 539 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 OAZ1P54368 228 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 SCRN1Q12765 414 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 STK3Q13188 491 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 ADGRF4Q8IZF3 695 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 SRBD1Q8N5C6 995 aaKnown RBP19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 ATG4CQ96DT6 458 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 MTMR8Q96EF0 704 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 UBA5Q9GZZ9 404 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 SLC38A10Q9HBR0 1119 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 SAGE1Q9NXZ1 904 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 RABGAP1Q9Y3P9 1069 aa19.09■□□□□ 0.65
SPTLC2-203ENST00000554901 RLFQ13129 1914 aa19.08■□□□□ 0.65
SPTLC2-203ENST00000554901 ATP2A1O14983 1001 aa19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 TLR2O60603 784 aa19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 PLEKHA8P1O95397 391 aa19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 CYP2C8P10632 490 aa19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 IFNAR1P17181 557 aa19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 NTRK3Q16288 839 aa19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 TMX3Q96JJ7 454 aa19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 RANBP17Q9H2T7 1088 aaKnown RBP19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 NCOA5Q9HCD5 579 aaKnown RBP19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 PARP14Q460N5 1801 aa19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 ADGRA2Q96PE1 1338 aa19.08■□□□□ 0.64
SPTLC2-203ENST00000554901 CYTH3O43739 400 aa19.07■□□□□ 0.64
SPTLC2-203ENST00000554901 LARGE1O95461 756 aa19.07■□□□□ 0.64
SPTLC2-203ENST00000554901 FUT2Q10981 343 aa19.07■□□□□ 0.64
SPTLC2-203ENST00000554901 TRAF1Q13077 416 aa19.07■□□□□ 0.64
SPTLC2-203ENST00000554901 JMJD4Q9H9V9 463 aa19.07■□□□□ 0.64
SPTLC2-203ENST00000554901 CTDP1Q9Y5B0 961 aaPredicted RBP19.07■□□□□ 0.64
SPTLC2-203ENST00000554901 K7ELQ4 463 aaPredicted RBP19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 CRHR2Q13324 411 aa19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 NBPF11Q86T75 865 aa19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 HSCBQ8IWL3 235 aa19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 REPS2Q8NFH8 660 aa19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 RRP36Q96EU6 259 aaKnown RBP19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 LLPHQ9BRT6 129 aaKnown RBP19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 RNF26Q9BY78 433 aaPredicted RBP19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 RNF186Q9NXI6 227 aa19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 MORF4L1Q9UBU8 362 aa19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 CNTNAP5Q8WYK1 1306 aa19.06■□□□□ 0.64
SPTLC2-203ENST00000554901 ZBTB5O15062 677 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 FAM110CQ1W6H9 321 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 SLC35G1Q2M3R5 365 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 BEGAINQ9BUH8 593 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 CPVLQ9H3G5 476 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 SEC63Q9UGP8 760 aaKnown RBP19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 A0A0G2JMZ2 1700 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 PNMA6FA0A0J9YX94 578 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 CDC37Q16543 378 aaPredicted RBP19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 C17orf99Q6UX52 265 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 TRIM22Q8IYM9 498 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 NECAB1Q8N987 351 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 JMYQ8N9B5 988 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 VAT1LQ9HCJ6 419 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 RBPJLQ9UBG7 517 aa19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 ZNF214Q9UL59 606 aaPredicted RBP19.05■□□□□ 0.64
SPTLC2-203ENST00000554901 PRPF3O43395 683 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms