RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CHGBP05060 677 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 TYRO3Q06418 890 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 GRIN2CQ14957 1233 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 ADCK5Q3MIX3 580 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 ADAMTS19Q8TE59 1207 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 ASB2Q96Q27 587 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 UHRF1Q96T88 793 aaPredicted RBP12.85□□□□□ -0.35
SRP54-205ENST00000554803 HELLSQ9NRZ9 838 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 PAG1Q9NWQ8 432 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 TPCN1Q9ULQ1 816 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 SEMA3EO15041 775 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 SLURP2P0DP57 97 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 HMGCS2P54868 508 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 CCL14Q16627 93 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 SARM1Q6SZW1 724 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 SMAP1Q8IYB5 467 aaPredicted RBP12.84□□□□□ -0.35
SRP54-205ENST00000554803 SPATA5Q8NB90 893 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 BADQ92934 168 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 ZNF396Q96N95 335 aaPredicted RBP12.84□□□□□ -0.35
SRP54-205ENST00000554803 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 DSCC1Q9BVC3 393 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 PIH1D3Q9NQM4 214 aaKnown RBP12.84□□□□□ -0.35
SRP54-205ENST00000554803 THEGQ9P2T0 379 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 ATP11BQ9Y2G3 1177 aa12.84□□□□□ -0.35
SRP54-205ENST00000554803 DDTLA6NHG4 134 aaPredicted RBP12.83□□□□□ -0.36
SRP54-205ENST00000554803 LARGE1O95461 756 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 TUBB4AP04350 444 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 PRDX5P30044 214 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 MAPK4P31152 587 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 RGS2P41220 211 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 SPP2Q13103 211 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 SLFNL1Q499Z3 407 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 TTC6Q86TZ1 520 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 ZSCAN29Q8IWY8 852 aaPredicted RBP12.83□□□□□ -0.36
SRP54-205ENST00000554803 ZNF280CQ8ND82 737 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 SMARCC2Q8TAQ2 1214 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 LEO1Q8WVC0 666 aaPredicted RBP12.83□□□□□ -0.36
SRP54-205ENST00000554803 APBA2Q99767 749 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 CCDC94Q9BW85 323 aaPredicted RBP12.83□□□□□ -0.36
SRP54-205ENST00000554803 C1QTNF1Q9BXJ1 281 aa12.83□□□□□ -0.36
SRP54-205ENST00000554803 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 KIF2AO00139 706 aaPredicted RBP12.82□□□□□ -0.36
SRP54-205ENST00000554803 DNM1LO00429 736 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 MSCO60682 206 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 PFKFB2O60825 505 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 ST3GAL1Q11201 340 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 TOB2Q14106 344 aaPredicted RBP12.82□□□□□ -0.36
SRP54-205ENST00000554803 MORN1Q5T089 497 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 GIMAP6Q6P9H5 292 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 PDCL2Q8N4E4 241 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 KBTBD3Q8NAB2 608 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 GPRC5AQ8NFJ5 357 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 LPAR1Q92633 364 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 FAM227BQ96M60 508 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 OSBPL5Q9H0X9 879 aaPredicted RBP12.82□□□□□ -0.36
SRP54-205ENST00000554803 PRDM5Q9NQX1 630 aaPredicted RBP12.82□□□□□ -0.36
SRP54-205ENST00000554803 FAM13BQ9NYF5 915 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 DDX20Q9UHI6 824 aaKnown RBP12.82□□□□□ -0.36
SRP54-205ENST00000554803 DENND2AQ9ULE3 1009 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 PAXBP1Q9Y5B6 917 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 REV3LO60673 3130 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 GBF1Q92538 1859 aa12.82□□□□□ -0.36
SRP54-205ENST00000554803 SMCHD1A6NHR9 2005 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 A0A0D9SFI3 127 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 H3BQV1 296 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 DHX16O60231 1041 aaKnown RBP12.81□□□□□ -0.36
SRP54-205ENST00000554803 TBC1D12O60347 775 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 LDHBP07195 334 aaKnown RBP12.81□□□□□ -0.36
SRP54-205ENST00000554803 DNAJB2P25686 324 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 IRX3P78415 501 aaPredicted RBP12.81□□□□□ -0.36
SRP54-205ENST00000554803 MRPS5P82675 430 aaKnown RBP12.81□□□□□ -0.36
SRP54-205ENST00000554803 SLC39A5Q6ZMH5 540 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 GPR142Q7Z601 462 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 PLA2G4DQ86XP0 818 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 MRFAP1L1Q96HT8 127 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 CHAMP1Q96JM3 812 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 RNPC3Q96LT9 517 aaKnown RBP12.81□□□□□ -0.36
SRP54-205ENST00000554803 NAT10Q9H0A0 1025 aaKnown RBP12.81□□□□□ -0.36
SRP54-205ENST00000554803 TXNRD2Q9NNW7 524 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 PDLIM7Q9NR12 457 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 MRVI1Q9Y6F6 885 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 SALL1Q9NSC2 1324 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
SRP54-205ENST00000554803 PEX10O60683 326 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 ZFYP08048 801 aaPredicted RBP12.8□□□□□ -0.36
SRP54-205ENST00000554803 HOXA7P31268 230 aaPredicted RBP12.8□□□□□ -0.36
SRP54-205ENST00000554803 HERVK_113P62684 666 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 RESTQ13127 1097 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 SNX17Q15036 470 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 STX1AQ16623 288 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 AKNAD1Q5T1N1 836 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 DHX32Q7L7V1 743 aaKnown RBP12.8□□□□□ -0.36
SRP54-205ENST00000554803 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 ZNF274Q96GC6 653 aaPredicted RBP12.8□□□□□ -0.36
SRP54-205ENST00000554803 GAS2L1Q99501 681 aaPredicted RBP12.8□□□□□ -0.36
SRP54-205ENST00000554803 P2RX7Q99572 595 aaKnown RBP12.8□□□□□ -0.36
SRP54-205ENST00000554803 ZNF576Q9H609 170 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms