RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 APOBRQ0VD83 1088 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 NLRC3Q7RTR2 1065 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 SLITRK4Q8IW52 837 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 SIRT2Q8IXJ6 389 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 ZNF654Q8IZM8 581 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 TCTN2Q96GX1 697 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 SLC9A7Q96T83 725 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 FOXP3Q9BZS1 431 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 PRDM14Q9GZV8 571 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 CCSER2Q9H7U1 834 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 DCP1AQ9NPI6 582 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 C9IYK1 514 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 FKTNO75072 461 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 USP2O75604 605 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 NME1P15531 152 aaKnown RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 RPL10P27635 214 aaKnown RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 ZC3H6P61129 1189 aaKnown RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 ZYXQ15942 572 aaKnown RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 KCNA10Q16322 511 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 BBS9Q3SYG4 887 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 REXO1Q8N1G1 1221 aaKnown RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 SYTL5Q8TDW5 730 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 SLC6A18Q96N87 628 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 SPON2Q9BUD6 331 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 NT5C1AQ9BXI3 368 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.42□□□□□ -2.02
PRPF39-208ENST00000554785 EPB41L4BQ9H329 900 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 CD320Q9NPF0 282 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 TCFL5Q9UL49 500 aa2.42□□□□□ -2.02
PRPF39-208ENST00000554785 MEIS1O00470 390 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 SHOXO15266 292 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 SUV39H1O43463 412 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 INHBBP09529 407 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 NR0B2Q15466 257 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 CLEC16AQ2KHT3 1053 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 ATG14Q6ZNE5 492 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 RUFY4Q6ZNE9 571 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 ZNF605Q86T29 641 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 TMEM151BQ8IW70 566 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 DAGLBQ8NCG7 672 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 NKD1Q969G9 470 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 HHIPL1Q96JK4 782 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 C8orf37Q96NL8 207 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 PLCD4Q9BRC7 762 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 SGPP1Q9BX95 441 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 ACBD3Q9H3P7 528 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 CAPN10Q9HC96 672 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 GPR160Q9UJ42 338 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 PPT2Q9UMR5 302 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 YBX2Q9Y2T7 364 aaKnown RBP2.41□□□□□ -2.02
PRPF39-208ENST00000554785 KIF21AQ7Z4S6 1674 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 FITM1A5D6W6 292 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 MEIS3P2A8K0S8 358 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 NPIPB6E9PJ23 425 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 CLEC3AO75596 197 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 SYN1P17600 705 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 NAALADL2Q58DX5 795 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 DIEXFQ68CQ4 756 aaKnown RBP2.41□□□□□ -2.02
PRPF39-208ENST00000554785 WAPLQ7Z5K2 1190 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 KIAA0825Q8IV33 1275 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 KCNN1Q92952 543 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 MCOLN1Q9GZU1 580 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 GCM1Q9NP62 436 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 GFOD1Q9NXC2 390 aa2.41□□□□□ -2.02
PRPF39-208ENST00000554785 TNFRSF10CO14798 259 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 SIGLEC6O43699 453 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 SYPP08247 313 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 ZNF165P49910 485 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 GNL2Q13823 731 aaKnown RBP2.4□□□□□ -2.03
PRPF39-208ENST00000554785 AUHQ13825 339 aaKnown RBP2.4□□□□□ -2.03
PRPF39-208ENST00000554785 MLECQ14165 292 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 TDRD10Q5VZ19 366 aaKnown RBP2.4□□□□□ -2.03
PRPF39-208ENST00000554785 DCAF15Q66K64 600 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 NLRX1Q86UT6 975 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 PPFIBP1Q86W92 1011 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 OXR1Q8N573 874 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 ZNF655Q8N720 491 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-208ENST00000554785 LINC00116Q8NCU8 138 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 TMEM52Q8NDY8 209 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 ENOX1Q8TC92 643 aaKnown RBP2.4□□□□□ -2.03
PRPF39-208ENST00000554785 INTS4Q96HW7 963 aaKnown RBP2.4□□□□□ -2.03
PRPF39-208ENST00000554785 MAP6Q96JE9 813 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 MKRN2Q9H000 416 aaKnown RBP2.4□□□□□ -2.03
PRPF39-208ENST00000554785 PARD6AQ9NPB6 346 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 FAM86C1Q9NVL1 165 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 ZNRF3Q9ULT6 936 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 SMG5Q9UPR3 1016 aaKnown RBP2.4□□□□□ -2.03
PRPF39-208ENST00000554785 INPP5FQ9Y2H2 1132 aa2.4□□□□□ -2.03
PRPF39-208ENST00000554785 HOXA5P20719 270 aa2.39□□□□□ -2.03
PRPF39-208ENST00000554785 RNF4P78317 190 aa2.39□□□□□ -2.03
PRPF39-208ENST00000554785 PAK2Q13177 524 aa2.39□□□□□ -2.03
PRPF39-208ENST00000554785 AXDND1Q5T1B0 1012 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-208ENST00000554785 CRTC3Q6UUV7 619 aa2.39□□□□□ -2.03
PRPF39-208ENST00000554785 CCDC81Q6ZN84 652 aa2.39□□□□□ -2.03
PRPF39-208ENST00000554785 RNF111Q6ZNA4 994 aa2.39□□□□□ -2.03
PRPF39-208ENST00000554785 CEP128Q6ZU80 1094 aa2.39□□□□□ -2.03
PRPF39-208ENST00000554785 VPS37DQ86XT2 251 aa2.39□□□□□ -2.03
PRPF39-208ENST00000554785 LILRA2Q8N149 483 aa2.39□□□□□ -2.03
PRPF39-208ENST00000554785 ANKS4BQ8N8V4 417 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms