RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SGPL1O95470 568 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 PCP11498 1178 aaKnown RBP12.57□□□□□ -0.4
SHMT2-213ENST00000554600 FCER1AP12319 257 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 ADORA2AP29274 412 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 GJA8P48165 433 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 GRB14Q14449 540 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 MFSD14CQ5VZR4 134 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 SNRNP48Q6IEG0 339 aaKnown RBP12.57□□□□□ -0.4
SHMT2-213ENST00000554600 KCTD1Q719H9 257 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 RIOX2Q8IUF8 465 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 SHISA4Q96DD7 197 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 ZKSCAN3Q9BRR0 538 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 IL25Q9H293 177 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 SLC5A4Q9NY91 659 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 RPTORQ8N122 1335 aa12.57□□□□□ -0.4
SHMT2-213ENST00000554600 ALPK3Q96L96 1907 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 KDM4AO75164 1064 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 TOP1P11387 765 aaKnown RBP12.56□□□□□ -0.4
SHMT2-213ENST00000554600 COPB2P35606 906 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 STAT2P52630 851 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 CACNB2Q08289 660 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-213ENST00000554600 KCTD2Q14681 263 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 RASGRP2Q7LDG7 609 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 NPLOC4Q8TAT6 608 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 CHURC1Q8WUH1 139 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 GMCL1Q96IK5 515 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 MMP19Q99542 508 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 TEX13BQ9BXU2 312 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 RAVER2Q9HCJ3 691 aaKnown RBP12.56□□□□□ -0.4
SHMT2-213ENST00000554600 ADAMTS5Q9UNA0 930 aa12.56□□□□□ -0.4
SHMT2-213ENST00000554600 B4E1Z4 1266 aa12.55□□□□□ -0.4
SHMT2-213ENST00000554600 FARP2O94887 1054 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-213ENST00000554600 CNGA1P29973 690 aa12.55□□□□□ -0.4
SHMT2-213ENST00000554600 RCSD1Q6JBY9 416 aa12.55□□□□□ -0.4
SHMT2-213ENST00000554600 FAM160B2Q86V87 743 aa12.55□□□□□ -0.4
SHMT2-213ENST00000554600 IQCA1Q86XH1 822 aa12.55□□□□□ -0.4
SHMT2-213ENST00000554600 REPS2Q8NFH8 660 aa12.55□□□□□ -0.4
SHMT2-213ENST00000554600 TMEM47Q9BQJ4 181 aa12.55□□□□□ -0.4
SHMT2-213ENST00000554600 PAK6Q9NQU5 681 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-213ENST00000554600 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
SHMT2-213ENST00000554600 FLRT1Q9NZU1 646 aa12.55□□□□□ -0.4
SHMT2-213ENST00000554600 ZNF214Q9UL59 606 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-213ENST00000554600 COBLO75128 1261 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 PGK2P07205 417 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 HOXC6P09630 235 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 CCND3P30281 292 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-213ENST00000554600 CYP2C19P33261 490 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 PTH1RQ03431 593 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 TRDNQ13061 729 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 CCDC174Q6PII3 467 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 KIAA1211Q6ZU35 1233 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 DCAF4Q8WV16 495 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 KRT23Q9C075 422 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 HOMER2Q9NSB8 354 aa12.54□□□□□ -0.4
SHMT2-213ENST00000554600 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-213ENST00000554600 FRMPD2Q68DX3 1309 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-213ENST00000554600 SGSM2O43147 1006 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 CENPBP07199 599 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-213ENST00000554600 FDX1P10109 184 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 SNAP25P60880 206 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 CCDC178Q5BJE1 867 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 HABP4Q5JVS0 413 aaKnown RBP12.53□□□□□ -0.4
SHMT2-213ENST00000554600 MAP3K21Q5TCX8 1036 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 ABRAQ8N0Z2 381 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 TTC14Q96N46 770 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 UBAC1Q9BSL1 405 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 KAT14Q9H8E8 782 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 SLC38A10Q9HBR0 1119 aa12.53□□□□□ -0.4
SHMT2-213ENST00000554600 BRCA2P51587 3418 aa12.52□□□□□ -0.4
SHMT2-213ENST00000554600 ALAS1P13196 640 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 SLC16A2P36021 539 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 OLFML2BQ68BL8 750 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 TTBK2Q6IQ55 1244 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.41
SHMT2-213ENST00000554600 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 DPF3Q92784 378 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-213ENST00000554600 HTATIP2Q9BUP3 242 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 CRISPLD2Q9H0B8 497 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 FBXO40Q9UH90 709 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 PRR12Q9ULL5 1215 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 RIPK3Q9Y572 518 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 LCTP09848 1927 aa12.52□□□□□ -0.41
SHMT2-213ENST00000554600 ATP2A1O14983 1001 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 PLA2G6O60733 806 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 PDHBP11177 359 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 CAPN2P17655 700 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 NOVP48745 357 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 NT5C2P49902 561 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 OAZ1P54368 228 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 SYDE2Q5VT97 1194 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 DGKHQ86XP1 1220 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 PNMA1Q8ND90 353 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 CHST13Q8NET6 341 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 PAWRQ96IZ0 340 aaKnown RBP12.51□□□□□ -0.41
SHMT2-213ENST00000554600 MAML3Q96JK9 1138 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms