RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TATDN1Q6P1N9 297 aa20.58■□□□□ 0.89
NEK9-204ENST00000554258 HFE2Q6ZVN8 426 aa20.58■□□□□ 0.89
NEK9-204ENST00000554258 ANKS1AQ92625 1134 aa20.58■□□□□ 0.89
NEK9-204ENST00000554258 XAGE2Q96GT9 111 aa20.58■□□□□ 0.89
NEK9-204ENST00000554258 MFSD14AQ96MC6 490 aa20.58■□□□□ 0.89
NEK9-204ENST00000554258 UBE2ZQ9H832 354 aaPredicted RBP20.58■□□□□ 0.89
NEK9-204ENST00000554258 SPC25Q9HBM1 224 aa20.58■□□□□ 0.89
NEK9-204ENST00000554258 DIS3Q9Y2L1 958 aaKnown RBP20.58■□□□□ 0.89
NEK9-204ENST00000554258 CACNA1BQ00975 2339 aa20.58■□□□□ 0.88
NEK9-204ENST00000554258 IRX5P78411 483 aaPredicted RBP20.57■□□□□ 0.88
NEK9-204ENST00000554258 TAP1Q03518 808 aa20.57■□□□□ 0.88
NEK9-204ENST00000554258 KCTD2Q14681 263 aa20.57■□□□□ 0.88
NEK9-204ENST00000554258 ZNF792Q3KQV3 632 aa20.57■□□□□ 0.88
NEK9-204ENST00000554258 CABP5Q9NP86 173 aa20.57■□□□□ 0.88
NEK9-204ENST00000554258 A0A1B0GUL7 405 aa20.56■□□□□ 0.88
NEK9-204ENST00000554258 SLC25A27O95847 323 aa20.56■□□□□ 0.88
NEK9-204ENST00000554258 IL9P15248 144 aa20.56■□□□□ 0.88
NEK9-204ENST00000554258 LEXMQ3ZCV2 418 aa20.56■□□□□ 0.88
NEK9-204ENST00000554258 CERKLQ49MI3 558 aaPredicted RBP20.56■□□□□ 0.88
NEK9-204ENST00000554258 GNASQ5JWF2 1037 aa20.56■□□□□ 0.88
NEK9-204ENST00000554258 NAA16Q6N069 864 aaPredicted RBP20.56■□□□□ 0.88
NEK9-204ENST00000554258 API5Q9BZZ5 524 aaKnown RBP20.56■□□□□ 0.88
NEK9-204ENST00000554258 WNT8AQ9H1J5 351 aa20.56■□□□□ 0.88
NEK9-204ENST00000554258 ZHX1Q9UKY1 873 aaPredicted RBP20.56■□□□□ 0.88
NEK9-204ENST00000554258 CACNA1HO95180 2353 aa20.56■□□□□ 0.88
NEK9-204ENST00000554258 POTEB3A0JP26 581 aa20.55■□□□□ 0.88
NEK9-204ENST00000554258 KCNA5P22460 613 aa20.55■□□□□ 0.88
NEK9-204ENST00000554258 POTEBQ6S5H4 581 aa20.55■□□□□ 0.88
NEK9-204ENST00000554258 NOC4LQ9BVI4 516 aaKnown RBP20.55■□□□□ 0.88
NEK9-204ENST00000554258 ZNF536O15090 1300 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 MCM3APO60318 1980 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 FLOT1O75955 427 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 ARHGEF15O94989 841 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 TRIM27P14373 513 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 DSG3P32926 999 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 PTPN5P54829 565 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 PPP4CP60510 307 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 TTLL4Q14679 1199 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 ZKSCAN2Q63HK3 967 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 PTCRAQ6ISU1 281 aaPredicted RBP20.54■□□□□ 0.88
NEK9-204ENST00000554258 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.54■□□□□ 0.88
NEK9-204ENST00000554258 ATG4CQ96DT6 458 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 SERPINB13Q9UIV8 391 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 PA2G4Q9UQ80 394 aaKnown RBP20.54■□□□□ 0.88
NEK9-204ENST00000554258 PARP14Q460N5 1801 aa20.54■□□□□ 0.88
NEK9-204ENST00000554258 GFRA3O60609 400 aa20.53■□□□□ 0.88
NEK9-204ENST00000554258 LPXNO60711 386 aa20.53■□□□□ 0.88
NEK9-204ENST00000554258 SCLYQ96I15 445 aa20.53■□□□□ 0.88
NEK9-204ENST00000554258 LMCD1Q9NZU5 365 aa20.53■□□□□ 0.88
NEK9-204ENST00000554258 AKAP2Q9Y2D5 859 aa20.53■□□□□ 0.88
NEK9-204ENST00000554258 RIF1Q5UIP0 2472 aaKnown RBP20.53■□□□□ 0.88
NEK9-204ENST00000554258 SCN5AQ14524 2016 aa20.53■□□□□ 0.88
NEK9-204ENST00000554258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.52■□□□□ 0.88
NEK9-204ENST00000554258 KIF28PB7ZC32 967 aa20.52■□□□□ 0.88
NEK9-204ENST00000554258 PFKMP08237 780 aa20.52■□□□□ 0.88
NEK9-204ENST00000554258 GORABQ5T7V8 394 aa20.52■□□□□ 0.88
NEK9-204ENST00000554258 PRSS33Q8NF86 280 aa20.52■□□□□ 0.88
NEK9-204ENST00000554258 FRAT1Q92837 279 aaPredicted RBP20.52■□□□□ 0.88
NEK9-204ENST00000554258 SLC9A7Q96T83 725 aa20.52■□□□□ 0.88
NEK9-204ENST00000554258 UPF3AQ9H1J1 476 aaKnown RBP20.52■□□□□ 0.88
NEK9-204ENST00000554258 CACNA1GO43497 2377 aa20.51■□□□□ 0.87
NEK9-204ENST00000554258 SNAI1O95863 264 aaPredicted RBP20.51■□□□□ 0.87
NEK9-204ENST00000554258 GJA9P57773 515 aa20.51■□□□□ 0.87
NEK9-204ENST00000554258 TMEM132BQ14DG7 1078 aa20.51■□□□□ 0.87
NEK9-204ENST00000554258 MSL3Q8N5Y2 521 aaKnown RBP20.51■□□□□ 0.87
NEK9-204ENST00000554258 VWCEQ96DN2 955 aa20.51■□□□□ 0.87
NEK9-204ENST00000554258 NEUROD6Q96NK8 337 aa20.51■□□□□ 0.87
NEK9-204ENST00000554258 GRXCR2A6NFK2 248 aa20.5■□□□□ 0.87
NEK9-204ENST00000554258 GUCY1A2P33402 732 aa20.5■□□□□ 0.87
NEK9-204ENST00000554258 SEPT2Q15019 361 aa20.5■□□□□ 0.87
NEK9-204ENST00000554258 ADGRA1Q86SQ6 560 aa20.5■□□□□ 0.87
NEK9-204ENST00000554258 GDPD5Q8WTR4 605 aa20.5■□□□□ 0.87
NEK9-204ENST00000554258 EHD4Q9H223 541 aa20.5■□□□□ 0.87
NEK9-204ENST00000554258 TNNQ9UQP3 1299 aa20.5■□□□□ 0.87
NEK9-204ENST00000554258 TECTAO75443 2155 aa20.5■□□□□ 0.87
NEK9-204ENST00000554258 A0A1W2PRG0 241 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 ADCY6O43306 1168 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 CENPBP07199 599 aaPredicted RBP20.49■□□□□ 0.87
NEK9-204ENST00000554258 ACTN1P12814 892 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 RRP1P56182 461 aaKnown RBP20.49■□□□□ 0.87
NEK9-204ENST00000554258 SPRED2Q7Z698 418 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 DEFB128Q7Z7B8 93 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 RIOX2Q8IUF8 465 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 SLC43A3Q8NBI5 491 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 PHOSPHO2Q8TCD6 241 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 TRPV6Q9H1D0 765 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 MYO5AQ9Y4I1 1855 aaKnown RBP20.49■□□□□ 0.87
NEK9-204ENST00000554258 DCHS1Q96JQ0 3298 aa20.49■□□□□ 0.87
NEK9-204ENST00000554258 FAM186AA6NE01 2351 aa20.48■□□□□ 0.87
NEK9-204ENST00000554258 MS4A1P11836 297 aa20.48■□□□□ 0.87
NEK9-204ENST00000554258 ARID4AP29374 1257 aaPredicted RBP20.48■□□□□ 0.87
NEK9-204ENST00000554258 PUS10Q3MIT2 529 aaKnown RBP20.48■□□□□ 0.87
NEK9-204ENST00000554258 CXCL17Q6UXB2 119 aa20.48■□□□□ 0.87
NEK9-204ENST00000554258 HERC6Q8IVU3 1022 aa20.48■□□□□ 0.87
NEK9-204ENST00000554258 B4GALT4O60513 344 aa20.47■□□□□ 0.87
NEK9-204ENST00000554258 MCAMP43121 646 aa20.47■□□□□ 0.87
NEK9-204ENST00000554258 TFCP2Q12800 502 aa20.47■□□□□ 0.87
NEK9-204ENST00000554258 ITGA7Q13683 1181 aa20.47■□□□□ 0.87
NEK9-204ENST00000554258 ACVR2BQ13705 512 aa20.47■□□□□ 0.87
NEK9-204ENST00000554258 CCDC144BQ3MJ40 725 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms