RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 ZNF467Q7Z7K2 595 aaPredicted RBP16.75■□□□□ 0.27
NEDD1-206ENST00000554226 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
NEDD1-206ENST00000554226 CLEC10AQ8IUN9 316 aa16.75■□□□□ 0.27
NEDD1-206ENST00000554226 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.75■□□□□ 0.27
NEDD1-206ENST00000554226 LENG1Q96BZ8 264 aaPredicted RBP16.75■□□□□ 0.27
NEDD1-206ENST00000554226 PPP1R9AQ9ULJ8 1098 aa16.75■□□□□ 0.27
NEDD1-206ENST00000554226 NKX3-2P78367 333 aa16.74■□□□□ 0.27
NEDD1-206ENST00000554226 PSRC1Q6PGN9 363 aaPredicted RBP16.74■□□□□ 0.27
NEDD1-206ENST00000554226 CCDC129Q6ZRS4 1044 aa16.74■□□□□ 0.27
NEDD1-206ENST00000554226 SDR42E1Q8WUS8 393 aa16.74■□□□□ 0.27
NEDD1-206ENST00000554226 GLT1D1Q96MS3 346 aa16.74■□□□□ 0.27
NEDD1-206ENST00000554226 ATP8A2Q9NTI2 1148 aa16.74■□□□□ 0.27
NEDD1-206ENST00000554226 FAM184BQ9ULE4 1060 aa16.74■□□□□ 0.27
NEDD1-206ENST00000554226 MCM3APO60318 1980 aa16.74■□□□□ 0.27
NEDD1-206ENST00000554226 ZNF532Q9HCE3 1301 aa16.73■□□□□ 0.27
NEDD1-206ENST00000554226 SNAI1O95863 264 aaPredicted RBP16.73■□□□□ 0.27
NEDD1-206ENST00000554226 CYP2D6P10635 497 aa16.73■□□□□ 0.27
NEDD1-206ENST00000554226 KCNA10Q16322 511 aa16.73■□□□□ 0.27
NEDD1-206ENST00000554226 LCORLQ8N3X6 602 aa16.73■□□□□ 0.27
NEDD1-206ENST00000554226 PCSK9Q8NBP7 692 aaKnown RBP16.73■□□□□ 0.27
NEDD1-206ENST00000554226 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
NEDD1-206ENST00000554226 C1QTNF1Q9BXJ1 281 aa16.73■□□□□ 0.27
NEDD1-206ENST00000554226 UPF3AQ9H1J1 476 aaKnown RBP16.73■□□□□ 0.27
NEDD1-206ENST00000554226 KANSL2Q9H9L4 492 aa16.73■□□□□ 0.27
NEDD1-206ENST00000554226 FBXO28Q9NVF7 368 aa16.73■□□□□ 0.27
NEDD1-206ENST00000554226 MYH7P12883 1935 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 XIRP2A4UGR9 3374 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 ATP2A1O14983 1001 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 RAB30Q15771 203 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 CCDC85BQ15834 202 aaPredicted RBP16.72■□□□□ 0.27
NEDD1-206ENST00000554226 C12orf60Q5U649 245 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 AACSQ86V21 672 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 FAM126BQ8IXS8 530 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 TMEM199Q8N511 208 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 DYNLL2Q96FJ2 89 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 TEX13BQ9BXU2 312 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
NEDD1-206ENST00000554226 EEF2P13639 858 aaKnown RBP16.71■□□□□ 0.27
NEDD1-206ENST00000554226 CSF2RAP15509 400 aa16.71■□□□□ 0.27
NEDD1-206ENST00000554226 GJA9P57773 515 aa16.71■□□□□ 0.27
NEDD1-206ENST00000554226 HERVK_113Q902F9 699 aa16.71■□□□□ 0.27
NEDD1-206ENST00000554226 GOPCQ9HD26 462 aa16.71■□□□□ 0.27
NEDD1-206ENST00000554226 CXXC1Q9P0U4 656 aaPredicted RBP16.71■□□□□ 0.27
NEDD1-206ENST00000554226 ARIH1Q9Y4X5 557 aaPredicted RBP16.71■□□□□ 0.27
NEDD1-206ENST00000554226 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 A0A0U1RQG5 324 aaPredicted RBP16.7■□□□□ 0.26
NEDD1-206ENST00000554226 MYADML2A6NDP7 307 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 ARVCFO00192 962 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 CD4P01730 458 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 ASGR1P07306 291 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 IGFBP4P22692 258 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 CDK8P49336 464 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 ZNF365Q70YC5 407 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 NECAB3Q96P71 396 aaPredicted RBP16.7■□□□□ 0.26
NEDD1-206ENST00000554226 MSRAQ9UJ68 235 aa16.7■□□□□ 0.26
NEDD1-206ENST00000554226 ADCY6O43306 1168 aa16.69■□□□□ 0.26
NEDD1-206ENST00000554226 ACRP10323 421 aa16.69■□□□□ 0.26
NEDD1-206ENST00000554226 BMP1P13497 986 aa16.69■□□□□ 0.26
NEDD1-206ENST00000554226 ABHD16BQ9H3Z7 469 aa16.69■□□□□ 0.26
NEDD1-206ENST00000554226 IL23AQ9NPF7 189 aa16.69■□□□□ 0.26
NEDD1-206ENST00000554226 CTAGE5O15320 804 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 ACVR2BQ13705 512 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 HSP90AB4PQ58FF6 505 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 FAM83BQ5T0W9 1011 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 SLC43A3Q8NBI5 491 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 SLF1Q9BQI6 1058 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
NEDD1-206ENST00000554226 SEZ6LQ9BYH1 1024 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
NEDD1-206ENST00000554226 MTIF3Q9H2K0 278 aaKnown RBP16.68■□□□□ 0.26
NEDD1-206ENST00000554226 NKX2-4Q9H2Z4 354 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 ARMT1Q9H993 441 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 SPC25Q9HBM1 224 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 EXOC6BQ9Y2D4 811 aa16.68■□□□□ 0.26
NEDD1-206ENST00000554226 YBX2Q9Y2T7 364 aaKnown RBP16.68■□□□□ 0.26
NEDD1-206ENST00000554226 USP17L12C9JPN9 530 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 USP17L21D6R901 530 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 SMIM22K7EJ46 135 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 GOLIM4O00461 696 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 TLR3O15455 904 aaKnown RBP16.67■□□□□ 0.26
NEDD1-206ENST00000554226 PRKAB2O43741 272 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 C6orf222P0C671 652 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-206ENST00000554226 ADD2P35612 726 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 CCDC144BQ3MJ40 725 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 SNRNP48Q6IEG0 339 aaKnown RBP16.67■□□□□ 0.26
NEDD1-206ENST00000554226 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-206ENST00000554226 AMOTL1Q8IY63 956 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 PRPF38AQ8NAV1 312 aaKnown RBP16.67■□□□□ 0.26
NEDD1-206ENST00000554226 RHPN1Q8TCX5 695 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 DDX11Q96FC9 970 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 FGD4Q96M96 766 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 PPP1R12CQ9BZL4 782 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 KATNBL1Q9H079 304 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 SLC28A3Q9HAS3 691 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-206ENST00000554226 ZHX1Q9UKY1 873 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-206ENST00000554226 RIPK3Q9Y572 518 aa16.67■□□□□ 0.26
NEDD1-206ENST00000554226 LRRC37A2A6NM11 1700 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms