RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CCND1P24385 295 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 CASP14P31944 242 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 TMEM62Q0P6H9 643 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 HSP90AB4PQ58FF6 505 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 ANKRD20A2Q5SQ80 823 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 ANKRD20A1Q5TYW2 823 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 ANKRD20A3Q5VUR7 823 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 USPL1Q5W0Q7 1092 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 ANO7Q6IWH7 933 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 CNGA4Q8IV77 575 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 SYCP3Q8IZU3 236 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 CNBD1Q8NA66 436 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 MLKLQ8NB16 471 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 CPLX3Q8WVH0 158 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 JAKMIP2Q96AA8 810 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 ANKRD27Q96NW4 1050 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 LRRC1Q9BTT6 524 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 MOV10L1Q9BXT6 1211 aaKnown RBP10.62□□□□□ -0.71
SIX4-202ENST00000554079 PHACTR1Q9C0D0 580 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 SAMSN1Q9NSI8 373 aaKnown RBP10.62□□□□□ -0.71
SIX4-202ENST00000554079 MYH10P35580 1976 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 CCT8L1PA6NM43 557 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 ZNF185O15231 689 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 CLTAP09496 248 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 ITIH3Q06033 890 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 KRT32Q14532 448 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 TMEM132EQ6IEE7 984 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 IQCEQ6IPM2 695 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 ARMC9Q7Z3E5 817 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 PPP1R42Q7Z4L9 355 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 MAATS1Q7Z4T9 603 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
SIX4-202ENST00000554079 MREGQ8N565 214 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 NAF1Q96HR8 494 aaKnown RBP10.62□□□□□ -0.71
SIX4-202ENST00000554079 CCDC43Q96MW1 224 aaKnown RBP10.62□□□□□ -0.71
SIX4-202ENST00000554079 HINFPQ9BQA5 517 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 SLF1Q9BQI6 1058 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 SUN2Q9UH99 717 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 GUCA1BQ9UMX6 200 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 MAPK8IP1Q9UQF2 711 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 PCDHA5Q9Y5H7 936 aa10.62□□□□□ -0.71
SIX4-202ENST00000554079 HIP1O00291 1037 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 TPD52L2O43399 206 aaKnown RBP10.61□□□□□ -0.71
SIX4-202ENST00000554079 SASH1O94885 1247 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 FBLN1P23142 703 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 MRPS35P82673 323 aaKnown RBP10.61□□□□□ -0.71
SIX4-202ENST00000554079 MAP3K12Q12852 859 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 CFAP58Q5T655 872 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 CCDC70Q6NSX1 233 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 ERICH1Q86X53 443 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 DZIP3Q86Y13 1208 aaKnown RBP10.61□□□□□ -0.71
SIX4-202ENST00000554079 SPICE1Q8N0Z3 855 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 CAGE1Q8TC20 777 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 MAIP1Q8WWC4 291 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 IFT43Q96FT9 208 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 NEK1Q96PY6 1258 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 USP44Q9H0E7 712 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 ESF1Q9H501 851 aaKnown RBP10.61□□□□□ -0.71
SIX4-202ENST00000554079 MAN1B1Q9UKM7 699 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 MYH7BA7E2Y1 1941 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 ITIH6Q6UXX5 1313 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 ADAMTSL3P82987 1691 aa10.61□□□□□ -0.71
SIX4-202ENST00000554079 EIF4E1BA6NMX2 242 aaKnown RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 EVI5O60447 810 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 TRIM37O94972 964 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 PENKP01210 267 aaPredicted RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 DRD4P21917 467 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 EIF4BP23588 611 aaKnown RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 RPL13P26373 211 aaKnown RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 PSMC4P43686 418 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 TAF11Q15544 211 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 CMPK2Q5EBM0 449 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 SFMBT2Q5VUG0 894 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 HAUS3Q68CZ6 603 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 CYP26C1Q6V0L0 522 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 PNMA8AQ86V59 439 aaPredicted RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 TMTC2Q8N394 836 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 ARFGAP2Q8N6H7 521 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 SYT15Q9BQS2 421 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 TAF1DQ9H5J8 278 aaPredicted RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 HAUS4Q9H6D7 363 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 ARHGEF10LQ9HCE6 1279 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 ECHDC1Q9NTX5 307 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 ABHD10Q9NUJ1 306 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 ADD3Q9UEY8 706 aaKnown RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 WDR17Q8IZU2 1322 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 DLC1Q96QB1 1528 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 MYO5BQ9ULV0 1848 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 ANO9A1A5B4 782 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 F8W031 263 aaPredicted RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 BCL9O00512 1426 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 IFIT3O14879 490 aaKnown RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 ZNF24P17028 368 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 KIF5BP33176 963 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 NCAPD2Q15021 1401 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 IFI16Q16666 785 aaKnown RBP10.6□□□□□ -0.71
SIX4-202ENST00000554079 AKNAD1Q5T1N1 836 aa10.6□□□□□ -0.71
SIX4-202ENST00000554079 ANO1Q5XXA6 986 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms