RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 PHF20L1A8MW92 1017 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 CXCL11O14625 94 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 CYP2C8P10632 490 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 INPP5BP32019 993 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 PLA2G4AP47712 749 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 CACNB3P54284 484 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 HDLBPQ00341 1268 aaKnown RBP8.72□□□□□ -1.01
ATXN3-224ENST00000554040 IFIT5Q13325 482 aaKnown RBP8.72□□□□□ -1.01
ATXN3-224ENST00000554040 GCKRQ14397 625 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 MIGA2Q7L4E1 593 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 RUNDC1Q96C34 613 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 MRIQ9BWK5 157 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 ZNF112Q9UJU3 913 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 ATXN7L1Q9ULK2 861 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-224ENST00000554040 IQSEC3Q9UPP2 1182 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-224ENST00000554040 PHF24Q9UPV7 400 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 COG6Q9Y2V7 657 aa8.72□□□□□ -1.01
ATXN3-224ENST00000554040 EYSQ5T1H1 3165 aa8.71□□□□□ -1.01
ATXN3-224ENST00000554040 PLIN1O60240 522 aa8.71□□□□□ -1.02
ATXN3-224ENST00000554040 HIBADHP31937 336 aaKnown RBP8.71□□□□□ -1.02
ATXN3-224ENST00000554040 SMTNP53814 917 aa8.71□□□□□ -1.02
ATXN3-224ENST00000554040 CTBSQ01459 385 aa8.71□□□□□ -1.02
ATXN3-224ENST00000554040 GRIK5Q16478 980 aa8.71□□□□□ -1.02
ATXN3-224ENST00000554040 PGBD3Q8N328 593 aa8.71□□□□□ -1.02
ATXN3-224ENST00000554040 C8orf58Q8NAV2 365 aa8.71□□□□□ -1.02
ATXN3-224ENST00000554040 FAM84BQ96KN1 310 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-224ENST00000554040 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.71□□□□□ -1.021e-11■■■■□ 25.2
ATXN3-224ENST00000554040 C11orf49Q9H6J7 331 aa8.71□□□□□ -1.02
ATXN3-224ENST00000554040 IFT57Q9NWB7 429 aa8.71□□□□□ -1.02
ATXN3-224ENST00000554040 PCDHGA11Q9Y5H2 935 aa8.71□□□□□ -1.02
ATXN3-224ENST00000554040 OTOFQ9HC10 1997 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 TNPO2O14787 897 aaKnown RBP8.7□□□□□ -1.02
ATXN3-224ENST00000554040 SOX11P35716 441 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 GYG1P46976 350 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 UBE4AQ14139 1066 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 EFHC2Q5JST6 749 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 NOL9Q5SY16 702 aaKnown RBP8.7□□□□□ -1.02
ATXN3-224ENST00000554040 APOBEC3HQ6NTF7 200 aaKnown RBP8.7□□□□□ -1.02
ATXN3-224ENST00000554040 FASTKD5Q7L8L6 764 aaKnown RBP8.7□□□□□ -1.02
ATXN3-224ENST00000554040 GALNT6Q8NCL4 622 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 ZDHHC15Q96MV8 337 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 FAM161BQ96MY7 647 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 TMOD2Q9NZR1 351 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 CDH23Q9H251 3354 aa8.7□□□□□ -1.02
ATXN3-224ENST00000554040 FGFR3P22607 806 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 GNAI1P63096 354 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 SEMA3FQ13275 785 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 LDHAL6AQ6ZMR3 332 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 TBC1D9Q6ZT07 1266 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 TBC1D22AQ8WUA7 517 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 TEKT1Q969V4 418 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 COA7Q96BR5 231 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 ZCCHC2Q9C0B9 1178 aaKnown RBP8.69□□□□□ -1.02
ATXN3-224ENST00000554040 ALG2Q9H553 416 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 SERTAD1Q9UHV2 236 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 OGDHLQ9ULD0 1010 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 SLC45A1Q9Y2W3 748 aa8.69□□□□□ -1.02
ATXN3-224ENST00000554040 ECM29Q5VYK3 1845 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 A0A0G2JLL6 359 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-224ENST00000554040 PROCP04070 461 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 FOXO4P98177 505 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 G2E3Q7L622 706 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 PRRT2Q7Z6L0 340 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-224ENST00000554040 FBXO33Q7Z6M2 555 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 TSPYL6Q8N831 410 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 MAFAQ8NHW3 353 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-224ENST00000554040 FAM151AQ8WW52 585 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 EDARADDQ8WWZ3 215 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 CDX2Q99626 313 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-224ENST00000554040 NIFKQ9BYG3 293 aaKnown RBP8.68□□□□□ -1.02
ATXN3-224ENST00000554040 MYH16Q9H6N6 1097 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 CNNM1Q9NRU3 951 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 GDF2Q9UK05 429 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-224ENST00000554040 CHMP3Q9Y3E7 222 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 NCOR1O75376 2440 aa8.68□□□□□ -1.02
ATXN3-224ENST00000554040 HMGCRP04035 888 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 BMP4P12644 408 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 COL8A1P27658 744 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 CALD1Q05682 793 aaKnown RBP8.67□□□□□ -1.02
ATXN3-224ENST00000554040 CHAF1AQ13111 956 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-224ENST00000554040 RALBP1Q15311 655 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 CCDC57Q2TAC2 916 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 TAF7LQ5H9L4 462 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 HHIPL2Q6UWX4 724 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 SLCO4C1Q6ZQN7 724 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 GOLGA6L1Q8N7Z2 621 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 LINS1Q8NG48 757 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 C1orf216Q8TAB5 229 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 ZNF594Q96JF6 807 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-224ENST00000554040 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 RPAP1Q9BWH6 1393 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-224ENST00000554040 STK31Q9BXU1 1019 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 SEMA6BQ9H3T3 888 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 GJD2Q9UKL4 321 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 AFG3L2Q9Y4W6 797 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 ZHX2Q9Y6X8 837 aa8.67□□□□□ -1.02
ATXN3-224ENST00000554040 PFASO15067 1338 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 A6NJY4 79 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 CDK2AP1O14519 115 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms