RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
CFAP54-204ENST00000553778 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
CFAP54-204ENST00000553778 RTEL1Q9NZ71 1219 aa11.28□□□□□ -0.6
CFAP54-204ENST00000553778 TUBE1Q9UJT0 475 aa11.28□□□□□ -0.6
CFAP54-204ENST00000553778 COL4A5P29400 1685 aa11.27□□□□□ -0.6
CFAP54-204ENST00000553778 CTAGE9A4FU28 777 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 SRRM3A6NNA2 597 aaPredicted RBP11.27□□□□□ -0.61
CFAP54-204ENST00000553778 PSMD14O00487 310 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 PFKFB2O60825 505 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 PHACTR2O75167 634 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 MAP4K4O95819 1239 aaPredicted RBP11.27□□□□□ -0.61
CFAP54-204ENST00000553778 SKOR1P84550 965 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 CFAP100Q494V2 611 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 RCSD1Q6JBY9 416 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
CFAP54-204ENST00000553778 FAM177A1Q8N128 213 aaPredicted RBP11.27□□□□□ -0.61
CFAP54-204ENST00000553778 OTUD6BQ8N6M0 293 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 TC2NQ8N9U0 490 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 BCAS4Q8TDM0 211 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 TATDN2Q93075 761 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 EVI5LQ96CN4 794 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 RPGRIP1Q96KN7 1286 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 PANX2Q96RD6 677 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 USP28Q96RU2 1077 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 SH3GL2Q99962 352 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 CAPS2Q9BXY5 557 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 KAT14Q9H8E8 782 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 SUGCTQ9HAC7 445 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 RRAGCQ9HB90 399 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 BATF3Q9NR55 127 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 SH3BP1Q9Y3L3 701 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 GRIN2DO15399 1336 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 RASSF9O75901 435 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 YEATS4O95619 227 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 VIL1P09327 827 aaKnown RBP11.27□□□□□ -0.61
CFAP54-204ENST00000553778 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
CFAP54-204ENST00000553778 ME1P48163 572 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 GTF2IP78347 998 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 TNNI3KQ59H18 835 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 STRIP1Q5VSL9 837 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 BRAPQ7Z569 592 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 MAB21L3Q8N8X9 362 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 CCDC148Q8NFR7 591 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 RUBCNQ92622 972 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 PLEKHA4Q9H4M7 779 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.27□□□□□ -0.61
CFAP54-204ENST00000553778 FPGT-TNNI3KV9GXZ4 949 aa11.27□□□□□ -0.61
CFAP54-204ENST00000553778 IQCA1LA6NCM1 817 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 TTC36A6NLP5 189 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 VEGFAP15692 232 aaPredicted RBP11.26□□□□□ -0.61
CFAP54-204ENST00000553778 RWDD2BP57060 319 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 TBC1D8BQ0IIM8 1120 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 STIM1Q13586 685 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 SPECC1LQ69YQ0 1117 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 TOGARAM2Q6ZUX3 1019 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 CLASRPQ8N2M8 674 aaKnown RBP11.26□□□□□ -0.61
CFAP54-204ENST00000553778 VCPKMTQ9H867 229 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 ATP6V0A4Q9HBG4 840 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 KLC4Q9NSK0 619 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 SPATS2LQ9NUQ6 558 aaKnown RBP11.26□□□□□ -0.61
CFAP54-204ENST00000553778 ETAA1Q9NY74 926 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 PCDHA7Q9UN72 937 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 TIAM2Q8IVF5 1701 aa11.26□□□□□ -0.61
CFAP54-204ENST00000553778 GOLGA6CA6NDK9 693 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 GOLGA8KD6RF30 607 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 GOLGA6DP0CG33 693 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 EPB41P11171 864 aaKnown RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 RPS12P25398 132 aaKnown RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 AP1ARQ63HQ0 302 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 CCDC102BQ68D86 513 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 NAIF1Q69YI7 327 aaPredicted RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 RSBN1LQ6PCB5 846 aaPredicted RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 TAX1BP1Q86VP1 789 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 TICAM2Q86XR7 235 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 ZNF483Q8TF39 744 aaPredicted RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 GPATCH3Q96I76 525 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 GOLGA6AQ9NYA3 693 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 PUF60Q9UHX1 559 aaKnown RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 A0A1B0GUL6 1792 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 ATP1A3P13637 1013 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 PAX7P23759 505 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 ADORA1P30542 326 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 USP14P54578 494 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 CEP85LQ5SZL2 805 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 TLDC1Q6P9B6 456 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 AGBL3Q8NEM8 1001 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 DPF2Q92785 391 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 EAF2Q96CJ1 260 aaPredicted RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 CRACR2AQ9BSW2 395 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 HOMER3Q9NSC5 361 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 HACL1Q9UJ83 578 aa11.25□□□□□ -0.61
CFAP54-204ENST00000553778 TTF2Q9UNY4 1162 aaKnown RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 IQSEC3Q9UPP2 1182 aaPredicted RBP11.25□□□□□ -0.61
CFAP54-204ENST00000553778 A0A087WWV3 80 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms