RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 TINF2Q9BSI4 451 aa14.83□□□□□ -0.04
SIX1-202ENST00000553535 NRBP1Q9UHY1 535 aa14.83□□□□□ -0.04
SIX1-202ENST00000553535 PRDM1O75626 825 aa14.82□□□□□ -0.04
SIX1-202ENST00000553535 RTP1P59025 263 aa14.82□□□□□ -0.04
SIX1-202ENST00000553535 MDM2Q00987 491 aaPredicted RBP14.82□□□□□ -0.04
SIX1-202ENST00000553535 KCTD2Q14681 263 aa14.82□□□□□ -0.04
SIX1-202ENST00000553535 SLC39A5Q6ZMH5 540 aa14.82□□□□□ -0.04
SIX1-202ENST00000553535 PRPF38AQ8NAV1 312 aaKnown RBP14.82□□□□□ -0.04
SIX1-202ENST00000553535 ZNF287Q9HBT7 754 aa14.82□□□□□ -0.04
SIX1-202ENST00000553535 MTMR4Q9NYA4 1195 aa14.82□□□□□ -0.04
SIX1-202ENST00000553535 KBTBD13C9JR72 458 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 LRRC41Q15345 812 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 ZMYM1Q5SVZ6 1142 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 CEP95Q96GE4 821 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 TEX13BQ9BXU2 312 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 SYNPO2Q9UMS6 1093 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 RIPK3Q9Y572 518 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 SALL3Q9BXA9 1300 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 ATP2A1O14983 1001 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 TAL1P17542 331 aaPredicted RBP14.81□□□□□ -0.04
SIX1-202ENST00000553535 SNX17Q15036 470 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 FAM47AQ5JRC9 791 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 NEDD1Q8NHV4 660 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 NACAP1Q9BZK3 213 aa14.81□□□□□ -0.04
SIX1-202ENST00000553535 A0A0C4DFX4 3053 aa14.8□□□□□ -0.04
SIX1-202ENST00000553535 ZNF865P0CJ78 1059 aaPredicted RBP14.8□□□□□ -0.04
SIX1-202ENST00000553535 ADCYAP1R1P41586 468 aa14.8□□□□□ -0.04
SIX1-202ENST00000553535 SNRNP48Q6IEG0 339 aaKnown RBP14.8□□□□□ -0.04
SIX1-202ENST00000553535 FSD1Q9BTV5 496 aa14.8□□□□□ -0.04
SIX1-202ENST00000553535 ATP11BQ9Y2G3 1177 aa14.8□□□□□ -0.04
SIX1-202ENST00000553535 DNAJC25-GNG10A0A024R161 153 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 ZBED4O75132 1171 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 TTLL1O95922 423 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 MX1P20591 662 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 PDE4BQ07343 736 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 C1orf53Q5VUE5 145 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.79□□□□□ -0.04
SIX1-202ENST00000553535 GMCL1P1Q8NEA9 526 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 LBHD1Q9BQE6 289 aaPredicted RBP14.79□□□□□ -0.04
SIX1-202ENST00000553535 SLC38A10Q9HBR0 1119 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 FEM1BQ9UK73 627 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 PLIN4Q96Q06 1357 aa14.79□□□□□ -0.04
SIX1-202ENST00000553535 FOXP2O15409 715 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 SNAI1O95863 264 aaPredicted RBP14.78□□□□□ -0.04
SIX1-202ENST00000553535 RARBP10826 455 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 RRP1P56182 461 aaKnown RBP14.78□□□□□ -0.04
SIX1-202ENST00000553535 PPARAQ07869 468 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 MAMDC4Q6UXC1 1216 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 CPXCR1Q8N123 301 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 MSL3Q8N5Y2 521 aaKnown RBP14.78□□□□□ -0.04
SIX1-202ENST00000553535 DEFB123Q8N688 67 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 FERMT2Q96AC1 680 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 KIFC2Q96AC6 838 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 DCBLD2Q96PD2 775 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 NAPBQ9H115 298 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 XPNPEP3Q9NQH7 507 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 PRKAG2Q9UGJ0 569 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 PHF24Q9UPV7 400 aa14.78□□□□□ -0.04
SIX1-202ENST00000553535 SLC3A2P08195 630 aaKnown RBP14.77□□□□□ -0.04
SIX1-202ENST00000553535 TSPY3P0CV98 308 aa14.77□□□□□ -0.04
SIX1-202ENST00000553535 TSPY8P0CW00 308 aa14.77□□□□□ -0.04
SIX1-202ENST00000553535 TFAP4Q01664 338 aa14.77□□□□□ -0.04
SIX1-202ENST00000553535 TRIM60Q495X7 471 aa14.77□□□□□ -0.04
SIX1-202ENST00000553535 SLFN13Q68D06 897 aa14.77□□□□□ -0.04
SIX1-202ENST00000553535 Q7L0L9 218 aa14.77□□□□□ -0.04
SIX1-202ENST00000553535 LRRC47Q8N1G4 583 aaKnown RBP14.77□□□□□ -0.04
SIX1-202ENST00000553535 DDX11Q96FC9 970 aa14.77□□□□□ -0.04
SIX1-202ENST00000553535 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.04
SIX1-202ENST00000553535 FARP1Q9Y4F1 1045 aaPredicted RBP14.77□□□□□ -0.04
SIX1-202ENST00000553535 LTBP2Q14767 1821 aa14.77□□□□□ -0.04
SIX1-202ENST00000553535 MCM3APO60318 1980 aa14.77□□□□□ -0.05
SIX1-202ENST00000553535 PGK1P00558 417 aa14.77□□□□□ -0.05
SIX1-202ENST00000553535 BMP3P12645 472 aa14.77□□□□□ -0.05
SIX1-202ENST00000553535 AKR1A1P14550 325 aa14.77□□□□□ -0.05
SIX1-202ENST00000553535 OAZ1P54368 228 aa14.77□□□□□ -0.05
SIX1-202ENST00000553535 ANKRD45Q5TZF3 282 aa14.77□□□□□ -0.05
SIX1-202ENST00000553535 ZNF467Q7Z7K2 595 aaPredicted RBP14.77□□□□□ -0.05
SIX1-202ENST00000553535 RNF180Q86T96 592 aa14.77□□□□□ -0.05
SIX1-202ENST00000553535 MTMR10Q9NXD2 777 aa14.77□□□□□ -0.05
SIX1-202ENST00000553535 CNPY2Q9Y2B0 182 aa14.77□□□□□ -0.05
SIX1-202ENST00000553535 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.77□□□□□ -0.05
SIX1-202ENST00000553535 SYNGAP1Q96PV0 1343 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 ADAMTS4O75173 837 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 FDX1P10109 184 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 SLC4A3P48751 1232 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 CCDC129Q6ZRS4 1044 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 SH3RF1Q7Z6J0 888 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 CHST13Q8NET6 341 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 CRBNQ96SW2 442 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 INCENPQ9NQS7 918 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 PDLIM7Q9NR12 457 aa14.76□□□□□ -0.05
SIX1-202ENST00000553535 CTDP1Q9Y5B0 961 aaPredicted RBP14.76□□□□□ -0.05
SIX1-202ENST00000553535 TRIM43BA6NCK2 446 aa14.75□□□□□ -0.05
SIX1-202ENST00000553535 TMEM232C9JQI7 657 aa14.75□□□□□ -0.05
SIX1-202ENST00000553535 POTEB2H3BUK9 544 aa14.75□□□□□ -0.05
SIX1-202ENST00000553535 TLE2Q04725 743 aa14.75□□□□□ -0.05
SIX1-202ENST00000553535 CTDSPL2Q05D32 466 aa14.75□□□□□ -0.05
SIX1-202ENST00000553535 TRIM43Q96BQ3 446 aaPredicted RBP14.75□□□□□ -0.05
SIX1-202ENST00000553535 LENG1Q96BZ8 264 aaPredicted RBP14.75□□□□□ -0.05
SIX1-202ENST00000553535 EVI5LQ96CN4 794 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms