RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 U2AF1L4Q8WU68 220 aaKnown RBP12.05□□□□□ -0.48
LINC00517-201ENST00000553396 DEFB118Q96PH6 123 aa12.05□□□□□ -0.48
LINC00517-201ENST00000553396 ZKSCAN3Q9BRR0 538 aa12.05□□□□□ -0.48
LINC00517-201ENST00000553396 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00517-201ENST00000553396 SYNPO2Q9UMS6 1093 aa12.05□□□□□ -0.48
LINC00517-201ENST00000553396 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
LINC00517-201ENST00000553396 B4E1Z4 1266 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 TMEM232C9JQI7 657 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 PCP11498 1178 aaKnown RBP12.04□□□□□ -0.48
LINC00517-201ENST00000553396 ADORA2AP29274 412 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 STAT3P40763 770 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 GJA8P48165 433 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 CCDC96Q2M329 555 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
LINC00517-201ENST00000553396 DPP9Q86TI2 863 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 RIOX2Q8IUF8 465 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 CPXCR1Q8N123 301 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
LINC00517-201ENST00000553396 NPLOC4Q8TAT6 608 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 RUFY2Q8WXA3 655 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 ESR2Q92731 530 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 CCDC136Q96JN2 1154 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 MROH8Q9H579 483 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 PAK6Q9NQU5 681 aaPredicted RBP12.04□□□□□ -0.48
LINC00517-201ENST00000553396 FLRT1Q9NZU1 646 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 CTNNA3Q9UI47 895 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 ZNF214Q9UL59 606 aaPredicted RBP12.04□□□□□ -0.48
LINC00517-201ENST00000553396 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 RPTORQ8N122 1335 aa12.04□□□□□ -0.48
LINC00517-201ENST00000553396 FRMPD3Q5JV73 1810 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 TNRC18O15417 2968 aaPredicted RBP12.03□□□□□ -0.48
LINC00517-201ENST00000553396 KDM4AO75164 1064 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 SGPL1O95470 568 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 SLC25A27O95847 323 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 NEFLP07196 543 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 TOP1P11387 765 aaKnown RBP12.03□□□□□ -0.48
LINC00517-201ENST00000553396 STAT2P52630 851 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 PTH1RQ03431 593 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 TRMT44Q8IYL2 757 aaKnown RBP12.03□□□□□ -0.48
LINC00517-201ENST00000553396 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 TMEM47Q9BQJ4 181 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 TEX13BQ9BXU2 312 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 RAVER2Q9HCJ3 691 aaKnown RBP12.03□□□□□ -0.48
LINC00517-201ENST00000553396 HMX1Q9NP08 348 aaPredicted RBP12.03□□□□□ -0.48
LINC00517-201ENST00000553396 SMCHD1A6NHR9 2005 aa12.03□□□□□ -0.48
LINC00517-201ENST00000553396 SGSM2O43147 1006 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 STRNO43815 780 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 COBLO75128 1261 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 ZBED4O75132 1171 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
LINC00517-201ENST00000553396 PGK2P07205 417 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 HOXC6P09630 235 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 FCER1AP12319 257 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 CCND3P30281 292 aaPredicted RBP12.02□□□□□ -0.49
LINC00517-201ENST00000553396 NOVP48745 357 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 CACNB2Q08289 660 aaPredicted RBP12.02□□□□□ -0.49
LINC00517-201ENST00000553396 MAP3K21Q5TCX8 1036 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 MFSD14CQ5VZR4 134 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 MMP19Q99542 508 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 SLC38A10Q9HBR0 1119 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 TCP11L1Q9NUJ3 509 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 RIPK3Q9Y572 518 aa12.02□□□□□ -0.49
LINC00517-201ENST00000553396 FRMPD2Q68DX3 1309 aaPredicted RBP12.02□□□□□ -0.49
LINC00517-201ENST00000553396 MCM3APO60318 1980 aa12.01□□□□□ -0.49
LINC00517-201ENST00000553396 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
LINC00517-201ENST00000553396 CYP2C19P33261 490 aa12.01□□□□□ -0.49
LINC00517-201ENST00000553396 SNAP25P60880 206 aa12.01□□□□□ -0.49
LINC00517-201ENST00000553396 KCTD2Q14681 263 aa12.01□□□□□ -0.49
LINC00517-201ENST00000553396 CCDC174Q6PII3 467 aa12.01□□□□□ -0.49
LINC00517-201ENST00000553396 FAM160B2Q86V87 743 aa12.01□□□□□ -0.49
LINC00517-201ENST00000553396 CHURC1Q8WUH1 139 aa12.01□□□□□ -0.49
LINC00517-201ENST00000553396 DCAF4Q8WV16 495 aa12.01□□□□□ -0.49
LINC00517-201ENST00000553396 HOMER2Q9NSB8 354 aa12.01□□□□□ -0.49
LINC00517-201ENST00000553396 CEP290O15078 2479 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 ATP2A1O14983 1001 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 CYP21A2P08686 494 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 PDHBP11177 359 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 TAL1P17542 331 aaPredicted RBP12□□□□□ -0.49
LINC00517-201ENST00000553396 COPB2P35606 906 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 SLC16A2P36021 539 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 TTBK2Q6IQ55 1244 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 IQCA1Q86XH1 822 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 ABRAQ8N0Z2 381 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 KRT23Q9C075 422 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 CNNM2Q9H8M5 875 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 GPCPD1Q9NPB8 672 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 SLC5A4Q9NY91 659 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 ZSWIM5Q9P217 1185 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 PRR12Q9ULL5 1215 aa12□□□□□ -0.49
LINC00517-201ENST00000553396 MYH6P13533 1939 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 CNGA1P29973 690 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 OAZ1P54368 228 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 BMP2KLQ5H9B9 411 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 DIS3LQ8TF46 1054 aaKnown RBP11.99□□□□□ -0.49
LINC00517-201ENST00000553396 MAML3Q96JK9 1138 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 AGBL1Q96MI9 1066 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms