RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 SMCHD1A6NHR9 2005 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 TBC1D12O60347 775 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 SLFN14P0C7P3 912 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 GJB2P29033 226 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 GRM1Q13255 1194 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 RTN1Q16799 776 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 CST9Q5W186 159 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 DCAF15Q66K64 600 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
MMP19-209ENST00000552872 WDR19Q8NEZ3 1342 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 KIF3CO14782 793 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 CPLX1O14810 134 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 PPP1R12BO60237 982 aaPredicted RBP11.73□□□□□ -0.53
MMP19-209ENST00000552872 MAP3K10Q02779 954 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 CCDC96Q2M329 555 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 SRBD1Q8N5C6 995 aaKnown RBP11.73□□□□□ -0.53
MMP19-209ENST00000552872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.73□□□□□ -0.53
MMP19-209ENST00000552872 CCDC17Q96LX7 622 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 SLC26A6Q9BXS9 759 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 ALDH8A1Q9H2A2 487 aaPredicted RBP11.73□□□□□ -0.53
MMP19-209ENST00000552872 KANSL2Q9H9L4 492 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
MMP19-209ENST00000552872 F5H6K3 240 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 PEX10O60683 326 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 ADCY5O95622 1261 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 PDHBP11177 359 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 TOP1P11387 765 aaKnown RBP11.72□□□□□ -0.53
MMP19-209ENST00000552872 PTPRAP18433 802 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 MCM2P49736 904 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 KLRC3Q07444 240 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 HOMER1Q86YM7 354 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 NSUN7Q8NE18 718 aaKnown RBP11.72□□□□□ -0.53
MMP19-209ENST00000552872 ZNF274Q96GC6 653 aaPredicted RBP11.72□□□□□ -0.53
MMP19-209ENST00000552872 PICK1Q9NRD5 415 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 TCP11L1Q9NUJ3 509 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 MAD2L2Q9UI95 211 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 SNCAIPQ9Y6H5 919 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 MYH6P13533 1939 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 DHX16O60231 1041 aaKnown RBP11.72□□□□□ -0.53
MMP19-209ENST00000552872 CTNND1O60716 968 aaKnown RBP11.72□□□□□ -0.53
MMP19-209ENST00000552872 ITGBL1O95965 494 aaPredicted RBP11.72□□□□□ -0.53
MMP19-209ENST00000552872 NDUFB10O96000 172 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 ASNSP08243 561 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 HMGCS2P54868 508 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 CUL4AQ13619 759 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 SCYL3Q8IZE3 742 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 TIGD1Q96MW7 591 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 FBXO28Q9NVF7 368 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 SMC3Q9UQE7 1217 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 PPP2R3BQ9Y5P8 575 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 PLIN4Q96Q06 1357 aa11.72□□□□□ -0.53
MMP19-209ENST00000552872 FDPSP14324 419 aaKnown RBP11.71□□□□□ -0.53
MMP19-209ENST00000552872 NF2P35240 595 aa11.71□□□□□ -0.53
MMP19-209ENST00000552872 EVCP57679 992 aa11.71□□□□□ -0.53
MMP19-209ENST00000552872 FAM83BQ5T0W9 1011 aa11.71□□□□□ -0.53
MMP19-209ENST00000552872 SLFN13Q68D06 897 aa11.71□□□□□ -0.53
MMP19-209ENST00000552872 CHADLQ6NUI6 762 aa11.71□□□□□ -0.53
MMP19-209ENST00000552872 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
MMP19-209ENST00000552872 ZSCAN31Q96LW9 406 aaPredicted RBP11.71□□□□□ -0.53
MMP19-209ENST00000552872 SH2B1Q9NRF2 756 aaPredicted RBP11.71□□□□□ -0.53
MMP19-209ENST00000552872 PHIPQ8WWQ0 1821 aa11.71□□□□□ -0.53
MMP19-209ENST00000552872 CYTH3O43739 400 aa11.71□□□□□ -0.54
MMP19-209ENST00000552872 IKQ13123 557 aaPredicted RBP11.71□□□□□ -0.54
MMP19-209ENST00000552872 NTRK3Q16288 839 aa11.71□□□□□ -0.54
MMP19-209ENST00000552872 FBXL16Q8N461 479 aa11.71□□□□□ -0.54
MMP19-209ENST00000552872 CTCFLQ8NI51 663 aaPredicted RBP11.71□□□□□ -0.54
MMP19-209ENST00000552872 GPKOWQ92917 476 aaPredicted RBP eCLIP11.71□□□□□ -0.54
MMP19-209ENST00000552872 ZNF112Q9UJU3 913 aa11.71□□□□□ -0.54
MMP19-209ENST00000552872 V9GY48 417 aaPredicted RBP11.71□□□□□ -0.54
MMP19-209ENST00000552872 KLRF2D3W0D1 207 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 IRF6O14896 467 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 SLC1A4P43007 532 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 HTRA3P83110 453 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 NCBP1Q09161 790 aaKnown RBP11.7□□□□□ -0.54
MMP19-209ENST00000552872 TMTC2Q8N394 836 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 CEP120Q8N960 986 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 CSADQ9Y600 493 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 ADAMTS3O15072 1205 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
MMP19-209ENST00000552872 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
MMP19-209ENST00000552872 IREB2P48200 963 aaKnown RBP11.7□□□□□ -0.54
MMP19-209ENST00000552872 FERMT3Q86UX7 667 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 KIAA1524Q8TCG1 905 aa11.7□□□□□ -0.54
MMP19-209ENST00000552872 ORC3Q9UBD5 711 aaPredicted RBP11.7□□□□□ -0.54
MMP19-209ENST00000552872 VPS37CA5D8V6 355 aaPredicted RBP11.69□□□□□ -0.54
MMP19-209ENST00000552872 TMEM232C9JQI7 657 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 TPM3P06753 285 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 GJA5P36382 358 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 CCDC183Q5T5S1 534 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 OPTNQ96CV9 577 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 SHISA4Q96DD7 197 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 INTS4Q96HW7 963 aaKnown RBP11.69□□□□□ -0.54
MMP19-209ENST00000552872 WNK4Q96J92 1243 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 ARHGEF10LQ9HCE6 1279 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 NYAP2Q9P242 653 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms