RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 CIAPIN1Q6FI81 312 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 SIAH1Q8IUQ4 282 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 ZFPM1Q8IX07 1006 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 TIGD1Q96MW7 591 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 DNAJC18Q9H819 358 aa11.32□□□□□ -0.6
TMEM116-216ENST00000552800 ZNF277Q9NRM2 450 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-216ENST00000552800 SAP30BPQ9UHR5 308 aaKnown RBP11.32□□□□□ -0.6
TMEM116-216ENST00000552800 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
TMEM116-216ENST00000552800 BTBD18B2RXH4 712 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 F8W031 263 aaPredicted RBP11.31□□□□□ -0.6
TMEM116-216ENST00000552800 SPTLC2O15270 562 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 CAVIN2O95810 425 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 BMP15O95972 392 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 PDHBP11177 359 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 R3HDM1Q15032 1099 aaKnown RBP11.31□□□□□ -0.6
TMEM116-216ENST00000552800 UVSSAQ2YD98 709 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
TMEM116-216ENST00000552800 OTUD7BQ6GQQ9 843 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 TMEM179Q6ZVK1 233 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 RAB11FIP4Q86YS3 637 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 CCDC144CPQ8IYA2 1237 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
TMEM116-216ENST00000552800 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 ZMYND12Q9H0C1 365 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 GJB4Q9NTQ9 266 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 BARHL2Q9NY43 387 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 PCDHA7Q9UN72 937 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 HPSEQ9Y251 543 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 ADAMTSL1Q8N6G6 1762 aa11.31□□□□□ -0.6
TMEM116-216ENST00000552800 KLRF2D3W0D1 207 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 PLA2G6O60733 806 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 XRCC6P12956 609 aaKnown RBP eCLIP11.3□□□□□ -0.6
TMEM116-216ENST00000552800 AKR1B1P15121 316 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 PTPREP23469 700 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 LSM11P83369 360 aaKnown RBP eCLIP11.3□□□□□ -0.6
TMEM116-216ENST00000552800 GUCY1B3Q02153 619 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 ORC2Q13416 577 aaPredicted RBP11.3□□□□□ -0.6
TMEM116-216ENST00000552800 DLGAP5Q15398 846 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 FMR1NBQ8N0W7 255 aaPredicted RBP11.3□□□□□ -0.6
TMEM116-216ENST00000552800 STK11IPQ8N1F8 1099 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 GMCL1P1Q8NEA9 526 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 JDP2Q8WYK2 163 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
TMEM116-216ENST00000552800 GRPEL1Q9HAV7 217 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 ZNF70Q9UC06 446 aaPredicted RBP11.3□□□□□ -0.6
TMEM116-216ENST00000552800 STX8Q9UNK0 236 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 CLIC4Q9Y696 253 aa11.3□□□□□ -0.6
TMEM116-216ENST00000552800 CNTNAP1P78357 1384 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 UBE2Q2LH0YL09 131 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 CUTAO60888 179 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 PARP1P09874 1014 aaKnown RBP11.29□□□□□ -0.6
TMEM116-216ENST00000552800 LIG1P18858 919 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 PICALMQ13492 652 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 CERKLQ49MI3 558 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-216ENST00000552800 BTNL9Q6UXG8 535 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 DCAF4Q8WV16 495 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 FBXW7Q969H0 707 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 GMCL1Q96IK5 515 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 CLSTN2Q9H4D0 955 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 PCDHAC2Q9Y5I4 1007 aa11.29□□□□□ -0.6
TMEM116-216ENST00000552800 SRPRBQ9Y5M8 271 aaKnown RBP11.29□□□□□ -0.6
TMEM116-216ENST00000552800 BAZ2BQ9UIF8 2168 aaKnown RBP11.28□□□□□ -0.6
TMEM116-216ENST00000552800 GOLGA6L4A6NEF3 574 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 WNT10BO00744 389 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 RAD17O75943 681 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 KRT2P35908 639 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 ZNF543Q08ER8 600 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
TMEM116-216ENST00000552800 FOXD4L6Q3SYB3 417 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-216ENST00000552800 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 FOXD4L3Q6VB84 417 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-216ENST00000552800 CMTR1Q8N1G2 835 aaKnown RBP11.28□□□□□ -0.6
TMEM116-216ENST00000552800 CCDC148Q8NFR7 591 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 CCDC12Q8WUD4 166 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-216ENST00000552800 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-216ENST00000552800 BRMS1Q9HCU9 246 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 PCDHA4Q9UN74 947 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 CEP131Q9UPN4 1083 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 MYH4Q9Y623 1939 aa11.28□□□□□ -0.6
TMEM116-216ENST00000552800 STXBP3O00186 592 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 NR1I2O75469 434 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 VEGFAP15692 232 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-216ENST00000552800 PRELPP51888 382 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 FOSBP53539 338 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 RESP18Q5W5W9 173 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 ARL6IP4Q66PJ3 421 aaKnown RBP11.27□□□□□ -0.61
TMEM116-216ENST00000552800 BLIDQ8IZY5 108 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 SPON1Q9HCB6 807 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 MYOZ2Q9NPC6 264 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 DACT1Q9NYF0 836 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 KCNJ14Q9UNX9 436 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 PCDHGA10Q9Y5H3 936 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 SBF1O95248 1867 aa11.27□□□□□ -0.61
TMEM116-216ENST00000552800 PNMA6FA0A0J9YX94 578 aa11.26□□□□□ -0.61
TMEM116-216ENST00000552800 SYCE3A1L190 88 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms