RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 SEC63Q9UGP8 760 aaKnown RBP15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 TTLL1O95922 423 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 SNHG28P0DPA3 235 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 ATP1A3P13637 1013 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 AFMP43652 599 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 NFIAQ12857 509 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 ARID5BQ14865 1188 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 EZH2Q15910 746 aaKnown RBP15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 E2F4Q16254 413 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 ASPRV1Q53RT3 343 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 HOMER1Q86YM7 354 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 KIAA0825Q8IV33 1275 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 CAMKK2Q96RR4 588 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 PIGSQ96S52 555 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 UBA5Q9GZZ9 404 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 EHD4Q9H223 541 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 VAT1LQ9HCJ6 419 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 STK32BQ9NY57 414 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 C10orf71Q711Q0 1435 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 SMCO2A6NFE2 343 aa15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 TPM2P07951 284 aa15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 GNA11P29992 359 aa15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 GSDMDP57764 484 aa15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 DPYDQ12882 1025 aa15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 INF2Q27J81 1249 aa15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 LRRC47Q8N1G4 583 aaKnown RBP15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 IQUBQ8NA54 791 aa15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 C6orf50Q9HD87 102 aa15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 FANCLQ9NW38 375 aa15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 GREB1LQ9C091 1923 aaPredicted RBP15.93■□□□□ 0.14
RAB3IP-216ENST00000552199 SOGA3Q5TF21 947 aa15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 KRT25Q7Z3Z0 450 aa15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 ZFPM1Q8IX07 1006 aa15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 ENOX1Q8TC92 643 aaKnown RBP15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 FRMPD2Q68DX3 1309 aaPredicted RBP15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 hCG_1984214I3L0E3 225 aa15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 CBFA2T2O43439 604 aa15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 EIF6P56537 245 aaKnown RBP15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 EN1Q05925 392 aaPredicted RBP15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 FMR1Q06787 632 aaKnown RBP eCLIP15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 CT47A1Q5JQC4 288 aaPredicted RBP15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 TMC6Q7Z403 805 aa15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 CLEC10AQ8IUN9 316 aa15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 ZNF713Q8N859 430 aaPredicted RBP15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 GSDMAQ96QA5 445 aa15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 PCDHAC2Q9Y5I4 1007 aa15.92■□□□□ 0.14
RAB3IP-216ENST00000552199 ESYT2A0FGR8 921 aa15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 LAD1O00515 517 aa15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 SERPINC1P01008 464 aa15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 UBASH3AP57075 661 aa15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 PDXDC2PQ6P474 469 aa15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 DTHD1Q6ZMT9 781 aa15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 CCDC17Q96LX7 622 aa15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 IDI2Q9BXS1 227 aa15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 TMEM60Q9H2L4 133 aa15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 DHX36Q9H2U1 1008 aaKnown RBP15.91■□□□□ 0.14
RAB3IP-216ENST00000552199 SIPA1L1O43166 1804 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 ERCC5P28715 1186 aaPredicted RBP15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 RBM5P52756 815 aaKnown RBP eCLIP15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 NONOQ15233 471 aaKnown RBP eCLIP15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 AOC3Q16853 763 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 CC2D2BQ6DHV5 1058 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 DPF2Q92785 391 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 GPCPD1Q9NPB8 672 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 RGS17Q9UGC6 210 aaPredicted RBP15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 SERPINA10Q9UK55 444 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 MYH4Q9Y623 1939 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 MPHOSPH10O00566 681 aaKnown RBP15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 NPM3O75607 178 aaKnown RBP15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 SKILP12757 684 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 CASP1P29466 404 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 TXLNAP40222 546 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 PRPHP41219 470 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 CCZ1BP86790 482 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 CCZ1P86791 482 aaPredicted RBP15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 ZNF543Q08ER8 600 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 DHX8Q14562 1220 aaKnown RBP15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 PPP4R3BQ5MIZ7 849 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 SUPT20HQ8NEM7 779 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 FAM198AQ9UFP1 575 aa15.9■□□□□ 0.14
RAB3IP-216ENST00000552199 ZNF18P17022 549 aa15.89■□□□□ 0.13
RAB3IP-216ENST00000552199 CACNB3P54284 484 aa15.89■□□□□ 0.13
RAB3IP-216ENST00000552199 POTEAQ6S8J7 498 aa15.89■□□□□ 0.13
RAB3IP-216ENST00000552199 MED15Q96RN5 788 aa15.89■□□□□ 0.13
RAB3IP-216ENST00000552199 DNAJC18Q9H819 358 aa15.89■□□□□ 0.13
RAB3IP-216ENST00000552199 NFE2L3Q9Y4A8 694 aa15.89■□□□□ 0.13
RAB3IP-216ENST00000552199 DDTLA6NHG4 134 aaPredicted RBP15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 GTPBP6O43824 516 aaPredicted RBP15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 SLURP2P0DP57 97 aa15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 TCP10Q12799 353 aa15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 CCDC150Q8NCX0 1101 aa15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 STAMQ92783 540 aa15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 PI4KBQ9UBF8 816 aa15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 CDC25AP30304 524 aa15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 CFAP100Q494V2 611 aa15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 GPATCH4Q5T3I0 446 aaKnown RBP15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 SH3BP5LQ7L8J4 393 aa15.88■□□□□ 0.13
RAB3IP-216ENST00000552199 NEK8Q86SG6 692 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms