RNA–Protein interactions for RNA: ENST00000552141.5

LMBR1L-224, Transcript of limb development membrane protein 1 like, human

TSL 2

Gene LMBR1L, Length 756 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1L-224	ENST00000552141	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	C16orf59	Q7L2K0	433 aa		11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	NUP88	Q99567	741 aa	Predicted RBP	11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	TEX13B	Q9BXU2	312 aa		11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	PUS7L	Q9H0K6	701 aa	Known RBP	11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	STARD7	Q9NQZ5	370 aa		11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	RIPK3	Q9Y572	518 aa		11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	SYNGAP1	Q96PV0	1343 aa		11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	CHD9	Q3L8U1	2897 aa		11.75	□□□□□ -0.53
LMBR1L-224	ENST00000552141	MUC3A	Q02505	3323 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	MYADML2	A6NDP7	307 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	MOXD2P	A6NHM9	499 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	DCDC2C	A8MYV0	355 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ATP2A1	O14983	1001 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	TIMP1	P01033	207 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	CENPB	P07199	599 aa	Predicted RBP	11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	RASA1	P20936	1047 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	CST5	P28325	142 aa	Predicted RBP	11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	CDK7	P50613	346 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	IRX5	P78411	483 aa	Predicted RBP	11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	KCNA10	Q16322	511 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	RASIP1	Q5U651	963 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	SNRNP48	Q6IEG0	339 aa	Known RBP	11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	AMOTL1	Q8IY63	956 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	NUP133	Q8WUM0	1156 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	FGD4	Q96M96	766 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	SLF1	Q9BQI6	1058 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.74	□□□□□ -0.53	1e-6	■■■■□ 20.4
LMBR1L-224	ENST00000552141	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.74	□□□□□ -0.53	6e-7	■■■■■ 30
LMBR1L-224	ENST00000552141	ZNF576	Q9H609	170 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ZBTB40	Q9NUA8	1239 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	FAM184B	Q9ULE4	1060 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	SLC4A4	Q9Y6R1	1079 aa		11.74	□□□□□ -0.53
LMBR1L-224	ENST00000552141	RAB11FIP3	O75154	756 aa		11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	DUSP11	O75319	330 aa	Known RBP	11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	HMMR	O75330	724 aa		11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ELP1	O95163	1332 aa		11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	COL11A1	P12107	1806 aa	Predicted RBP	11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	MFSD5	Q6N075	450 aa		11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	SYMPK	Q92797	1274 aa	Known RBP	11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	UPF3A	Q9H1J1	476 aa	Known RBP	11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	NYAP2	Q9P242	653 aa		11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.73	□□□□□ -0.53
LMBR1L-224	ENST00000552141	GREB1L	Q9C091	1923 aa	Predicted RBP	11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	IGKV6D-41	A0A0C4DH26	115 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	GSG1L2	A8MUP6	293 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141		F5H6K3	240 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	CTAGE5	O15320	804 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	RAD21	O60216	631 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	NDUFB10	O96000	172 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	KLRC3	Q07444	240 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ACVR2B	Q13705	512 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	SBK1	Q52WX2	424 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	TJAP1	Q5JTD0	557 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	TMEM240	Q5SV17	173 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	PRPF38A	Q8NAV1	312 aa	Known RBP	11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	TIFA	Q96CG3	184 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	DDX11	Q96FC9	970 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	DDRGK1	Q96HY6	314 aa		11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	STRBP	Q96SI9	672 aa	Known RBP	11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.72	□□□□□ -0.53
LMBR1L-224	ENST00000552141	MROH7	Q68CQ1	1323 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ASGR1	P07306	291 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	CSF2RA	P15509	400 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	PBX2	P40425	430 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	GJA9	P57773	515 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	NKX3-2	P78367	333 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	CCDC144B	Q3MJ40	725 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	FAM126B	Q8IXS8	530 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	GLT1D1	Q96MS3	346 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	PBX4	Q9BYU1	374 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	KATNBL1	Q9H079	304 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	BCL11A	Q9H165	835 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	ABHD16B	Q9H3Z7	469 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	SLC38A10	Q9HBR0	1119 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	PLXNA1	Q9UIW2	1896 aa		11.71	□□□□□ -0.53
LMBR1L-224	ENST00000552141	MYH8	P13535	1937 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	BDP1	A6H8Y1	2624 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	GRXCR1	A8MXD5	290 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	ARVCF	O00192	962 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	C6orf222	P0C671	652 aa	Predicted RBP	11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	PPIG	Q13427	754 aa	Known RBP eCLIP	11.7	□□□□□ -0.54	8e-8	■■■■□ 21.5
LMBR1L-224	ENST00000552141	ZSCAN25	Q6NSZ9	544 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	GIMAP6	Q6P9H5	292 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	CPXCR1	Q8N123	301 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	PCSK9	Q8NBP7	692 aa	Known RBP	11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	MKL1	Q969V6	931 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	RAVER2	Q9HCJ3	691 aa	Known RBP	11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	DDX19B	Q9UMR2	479 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	COG6	Q9Y2V7	657 aa		11.7	□□□□□ -0.54
LMBR1L-224	ENST00000552141	NCOR1	O75376	2440 aa		11.69	□□□□□ -0.54
LMBR1L-224	ENST00000552141		A0A0U1RQG5	324 aa	Predicted RBP	11.69	□□□□□ -0.54
LMBR1L-224	ENST00000552141	ZBED4	O75132	1171 aa		11.69	□□□□□ -0.54
LMBR1L-224	ENST00000552141	CD4	P01730	458 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms