RNA–Protein interactions for RNA: ENST00000552125.1

TUBA1C-208, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-208ENST00000552125 GPR153Q6NV75 609 aa12.79□□□□□ -0.36
TUBA1C-208ENST00000552125 MAMDC4Q6UXC1 1216 aa12.79□□□□□ -0.36
TUBA1C-208ENST00000552125 ARRDC4Q8NCT1 418 aa12.79□□□□□ -0.36
TUBA1C-208ENST00000552125 CLIP2Q9UDT6 1046 aa12.79□□□□□ -0.36
TUBA1C-208ENST00000552125 FBXO40Q9UH90 709 aa12.79□□□□□ -0.36
TUBA1C-208ENST00000552125 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
TUBA1C-208ENST00000552125 PLS1Q14651 629 aa12.78□□□□□ -0.36
TUBA1C-208ENST00000552125 SNX17Q15036 470 aa12.78□□□□□ -0.36
TUBA1C-208ENST00000552125 MCMDC2Q4G0Z9 681 aa12.78□□□□□ -0.36
TUBA1C-208ENST00000552125 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
TUBA1C-208ENST00000552125 FAM160B2Q86V87 743 aa12.78□□□□□ -0.36
TUBA1C-208ENST00000552125 CHST13Q8NET6 341 aa12.78□□□□□ -0.36
TUBA1C-208ENST00000552125 MMP19Q99542 508 aa12.78□□□□□ -0.36
TUBA1C-208ENST00000552125 TINF2Q9BSI4 451 aa12.78□□□□□ -0.36
TUBA1C-208ENST00000552125 TCP11L1Q9NUJ3 509 aa12.78□□□□□ -0.36
TUBA1C-208ENST00000552125 ZBED4O75132 1171 aa12.77□□□□□ -0.37
TUBA1C-208ENST00000552125 PRDM1O75626 825 aa12.77□□□□□ -0.37
TUBA1C-208ENST00000552125 BMP3P12645 472 aa12.77□□□□□ -0.37
TUBA1C-208ENST00000552125 TFAP4Q01664 338 aa12.77□□□□□ -0.37
TUBA1C-208ENST00000552125 NUCB1Q02818 461 aa12.77□□□□□ -0.37
TUBA1C-208ENST00000552125 CHURC1Q8WUH1 139 aa12.77□□□□□ -0.37
TUBA1C-208ENST00000552125 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
TUBA1C-208ENST00000552125 STAT2P52630 851 aa12.76□□□□□ -0.37
TUBA1C-208ENST00000552125 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
TUBA1C-208ENST00000552125 TKFCQ3LXA3 575 aa12.76□□□□□ -0.37
TUBA1C-208ENST00000552125 SLFN13Q68D06 897 aa12.76□□□□□ -0.37
TUBA1C-208ENST00000552125 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
TUBA1C-208ENST00000552125 CHD1LQ86WJ1 897 aa12.76□□□□□ -0.37
TUBA1C-208ENST00000552125 IL17RBQ9NRM6 502 aa12.76□□□□□ -0.37
TUBA1C-208ENST00000552125 A0A0D9SFI3 127 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 FGAP02671 866 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 NKX3-2P78367 333 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 LAMA4Q16363 1823 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 LRRC26Q2I0M4 334 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 C7orf61Q8IZ16 206 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 STAG1Q8WVM7 1258 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 TTC14Q96N46 770 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 NUP88Q99567 741 aaPredicted RBP12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 MAF1Q9H063 256 aa12.75□□□□□ -0.37
TUBA1C-208ENST00000552125 LOC102724159A0A0B4J2E5 919 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 TSPY2A6NKD2 308 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 KBTBD13C9JR72 458 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 HIP1O00291 1037 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 ZNF865P0CJ78 1059 aaPredicted RBP12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 AKR1A1P14550 325 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 CNGA1P29973 690 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 SLC1A4P43007 532 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 PWP2Q15269 919 aaKnown RBP12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 VPS53Q5VIR6 699 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 BTNL9Q6UXG8 535 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 CCDC129Q6ZRS4 1044 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 DCAF4Q8WV16 495 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 FAM227BQ96M60 508 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 TSEN34Q9BSV6 310 aaKnown RBP12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 LNPKQ9C0E8 428 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 PNMA2Q9UL42 364 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 PHF24Q9UPV7 400 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 RIPK3Q9Y572 518 aa12.74□□□□□ -0.37
TUBA1C-208ENST00000552125 ZNF536O15090 1300 aa12.73□□□□□ -0.37
TUBA1C-208ENST00000552125 RARBP10826 455 aa12.73□□□□□ -0.37
TUBA1C-208ENST00000552125 CST5P28325 142 aaPredicted RBP12.73□□□□□ -0.37
TUBA1C-208ENST00000552125 LRRC41Q15345 812 aa12.73□□□□□ -0.37
TUBA1C-208ENST00000552125 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
TUBA1C-208ENST00000552125 LRRC47Q8N1G4 583 aaKnown RBP12.73□□□□□ -0.37
TUBA1C-208ENST00000552125 RNF41Q9H4P4 317 aaPredicted RBP12.73□□□□□ -0.37
TUBA1C-208ENST00000552125 CNPY2Q9Y2B0 182 aa12.73□□□□□ -0.37
TUBA1C-208ENST00000552125 TACC3Q9Y6A5 838 aa12.73□□□□□ -0.37
TUBA1C-208ENST00000552125 LTBP2Q14767 1821 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 TMEM232C9JQI7 657 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 RAD21O60216 631 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 SNAI1O95863 264 aaPredicted RBP12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 IGHDP01880 384 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 PGK2P07205 417 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 SDSP20132 328 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 MAGEA10P43363 369 aaPredicted RBP12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 CTDSPL2Q05D32 466 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 NMIQ13287 307 aaPredicted RBP12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 SLC39A5Q6ZMH5 540 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 RNF180Q86T96 592 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 ZNF589Q86UQ0 364 aaPredicted RBP12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 TDHQ8IZJ6 230 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 FAM133AQ8N9E0 248 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 KIFC2Q96AC6 838 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 DDX11Q96FC9 970 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 FGD4Q96M96 766 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 SENP6Q9GZR1 1112 aaPredicted RBP12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 ABHD16BQ9H3Z7 469 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 ACAD9Q9H845 621 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 STX8Q9UNK0 236 aa12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
TUBA1C-208ENST00000552125 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.37
TUBA1C-208ENST00000552125 ADAMTS4O75173 837 aa12.71□□□□□ -0.37
TUBA1C-208ENST00000552125 DUSP11O75319 330 aaKnown RBP12.71□□□□□ -0.37
TUBA1C-208ENST00000552125 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms