RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 CWC22Q9HCG8 908 aaKnown RBP6.68□□□□□ -1.34
HOXB3-213ENST00000552000 RBPJLQ9UBG7 517 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 ABCF2Q9UG63 623 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 DENND2AQ9ULE3 1009 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 UTYO14607 1347 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 SALL1Q9NSC2 1324 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 CDK5RAP2Q96SN8 1893 aa6.68□□□□□ -1.34
HOXB3-213ENST00000552000 PPFIA3O75145 1194 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 UPP2O95045 317 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 HOXA7P31268 230 aaPredicted RBP6.67□□□□□ -1.34
HOXB3-213ENST00000552000 CAP2P40123 477 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 MAP2K5Q13163 448 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 GRIN2CQ14957 1233 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 PTPRNQ16849 979 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 GJC2Q5T442 439 aaPredicted RBP6.67□□□□□ -1.34
HOXB3-213ENST00000552000 ATG9AQ7Z3C6 839 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 PPM1EQ8WY54 764 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 BAP1Q92560 729 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 TBC1D2Q9BYX2 928 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 SIL1Q9H173 461 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 AS3MTQ9HBK9 375 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 TMOD4Q9NZQ9 345 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 FLRT1Q9NZU1 646 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 DDX20Q9UHI6 824 aaKnown RBP6.67□□□□□ -1.34
HOXB3-213ENST00000552000 NDUFB9Q9Y6M9 179 aa6.67□□□□□ -1.34
HOXB3-213ENST00000552000 ZNFX1Q9P2E3 1918 aaKnown RBP6.67□□□□□ -1.34
HOXB3-213ENST00000552000 PLXNA1Q9UIW2 1896 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 TRIM43BA6NCK2 446 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 DNM1LO00429 736 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 MSCO60682 206 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 ADORA1P30542 326 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 RFX5P48382 616 aaPredicted RBP6.66□□□□□ -1.34
HOXB3-213ENST00000552000 BACE1P56817 501 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 RHBDL3P58872 404 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 MAP3K12Q12852 859 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 SHROOM1Q2M3G4 852 aaPredicted RBP6.66□□□□□ -1.34
HOXB3-213ENST00000552000 TRIM60Q495X7 471 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 WDR78Q5VTH9 848 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 ANO1Q5XXA6 986 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 SLC39A5Q6ZMH5 540 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 SH3RF1Q7Z6J0 888 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 ZGPATQ8N5A5 531 aaKnown RBP6.66□□□□□ -1.34
HOXB3-213ENST00000552000 ZNF511Q8NB15 262 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 ADAMTS19Q8TE59 1207 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 LPAR1Q92633 364 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 TRIM43Q96BQ3 446 aaPredicted RBP6.66□□□□□ -1.34
HOXB3-213ENST00000552000 EDC3Q96F86 508 aaKnown RBP6.66□□□□□ -1.34
HOXB3-213ENST00000552000 RNPC3Q96LT9 517 aaKnown RBP6.66□□□□□ -1.34
HOXB3-213ENST00000552000 WDR18Q9BV38 432 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 PDLIM7Q9NR12 457 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 CEP126Q9P2H0 1117 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 MROH7-TTC4A0A0A0MT08 1334 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 MYO7AQ13402 2215 aa6.66□□□□□ -1.34
HOXB3-213ENST00000552000 CACNA1GO43497 2377 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 SIPA1L1O43166 1804 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 GPR75-ASB3A0A0A6YYF3 556 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 KBTBD13C9JR72 458 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 GLRX3O76003 335 aaKnown RBP6.65□□□□□ -1.34
HOXB3-213ENST00000552000 ZIC2O95409 532 aaPredicted RBP6.65□□□□□ -1.34
HOXB3-213ENST00000552000 FDX1P10109 184 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 CYP2C19P33261 490 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 EPHB4P54760 987 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 JAG1P78504 1218 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 ATP2B2Q01814 1243 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 MECOMQ03112 1051 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 TLE2Q04725 743 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 RASGRF1Q13972 1273 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 SPTY2D1Q68D10 685 aaPredicted RBP6.65□□□□□ -1.34
HOXB3-213ENST00000552000 CCDC102BQ68D86 513 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 TRPV1Q8NER1 839 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 FAM174AQ8TBP5 190 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 GTF3C2Q8WUA4 911 aaPredicted RBP6.65□□□□□ -1.34
HOXB3-213ENST00000552000 FERMT2Q96AC1 680 aa6.65□□□□□ -1.34
HOXB3-213ENST00000552000 UHRF1Q96T88 793 aaPredicted RBP6.65□□□□□ -1.34
HOXB3-213ENST00000552000 TRIOO75962 3097 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 TPRP12270 2363 aaKnown RBP6.64□□□□□ -1.35
HOXB3-213ENST00000552000 SLC15A5A6NIM6 579 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 C19orf81C9J6K1 198 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 USP17L10C9JJH3 530 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 CNMDO75829 334 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 ASNSP08243 561 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 BMP2P12643 396 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 ITGB8P26012 769 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 ADCYAP1R1P41586 468 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 CCNA1P78396 465 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 KCNH2Q12809 1159 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 ARID5BQ14865 1188 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 CCDC184Q52MB2 194 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 WDR63Q8IWG1 891 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 TEX11Q8IYF3 940 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 ARRDC4Q8NCT1 418 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 NPLOC4Q8TAT6 608 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 ZNF384Q8TF68 577 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 CNTNAP3BQ96NU0 1288 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 CNTNAP3Q9BZ76 1288 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 USP44Q9H0E7 712 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 ZNF576Q9H609 170 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 EVA1BQ9NVM1 165 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 THEGQ9P2T0 379 aa6.64□□□□□ -1.35
HOXB3-213ENST00000552000 HERC5Q9UII4 1024 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms