RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PPP1R12CQ9BZL4 782 aa18.51■□□□□ 0.55
CACNB3-220ENST00000551716 DBNLQ9UJU6 430 aaKnown RBP18.51■□□□□ 0.55
CACNB3-220ENST00000551716 SNAI1O95863 264 aaPredicted RBP18.5■□□□□ 0.55
CACNB3-220ENST00000551716 RARSP54136 660 aaKnown RBP18.5■□□□□ 0.55
CACNB3-220ENST00000551716 GJA9P57773 515 aa18.5■□□□□ 0.55
CACNB3-220ENST00000551716 SKIV2LQ15477 1246 aaKnown RBP18.5■□□□□ 0.55
CACNB3-220ENST00000551716 GNASQ5JWF2 1037 aa18.5■□□□□ 0.55
CACNB3-220ENST00000551716 ZHX1Q9UKY1 873 aaPredicted RBP18.5■□□□□ 0.55
CACNB3-220ENST00000551716 COG5Q9UP83 839 aa18.5■□□□□ 0.55
CACNB3-220ENST00000551716 PCDHA11Q9Y5I1 949 aa18.5■□□□□ 0.55
CACNB3-220ENST00000551716 PIEZO1Q92508 2521 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 GTPBP6O43824 516 aaPredicted RBP18.49■□□□□ 0.55
CACNB3-220ENST00000551716 POU3F3P20264 500 aaPredicted RBP18.49■□□□□ 0.55
CACNB3-220ENST00000551716 CYP2C18P33260 490 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 ACVR2BQ13705 512 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 TTF1Q15361 905 aaPredicted RBP18.49■□□□□ 0.55
CACNB3-220ENST00000551716 PPP2R2DQ66LE6 453 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 MICALL1Q8N3F8 863 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 SSH3Q8TE77 659 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 UPF3AQ9H1J1 476 aaKnown RBP18.49■□□□□ 0.55
CACNB3-220ENST00000551716 ABHD16BQ9H3Z7 469 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 GOPCQ9HD26 462 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 ZNF214Q9UL59 606 aaPredicted RBP18.49■□□□□ 0.55
CACNB3-220ENST00000551716 PPP1R9AQ9ULJ8 1098 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 YBX2Q9Y2T7 364 aaKnown RBP18.49■□□□□ 0.55
CACNB3-220ENST00000551716 SLC4A7Q9Y6M7 1214 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 A0A0G2JMZ2 1700 aa18.49■□□□□ 0.55
CACNB3-220ENST00000551716 CABYRO75952 493 aa18.48■□□□□ 0.55
CACNB3-220ENST00000551716 CD4P01730 458 aa18.48■□□□□ 0.55
CACNB3-220ENST00000551716 ATP8B2P98198 1209 aa18.48■□□□□ 0.55
CACNB3-220ENST00000551716 TFF2Q03403 129 aa18.48■□□□□ 0.55
CACNB3-220ENST00000551716 TEX13BQ9BXU2 312 aa18.48■□□□□ 0.55
CACNB3-220ENST00000551716 CCDC8Q9H0W5 538 aaPredicted RBP18.48■□□□□ 0.55
CACNB3-220ENST00000551716 EPHX3Q9H6B9 360 aa18.48■□□□□ 0.55
CACNB3-220ENST00000551716 KANSL2Q9H9L4 492 aa18.48■□□□□ 0.55
CACNB3-220ENST00000551716 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
CACNB3-220ENST00000551716 CHD9Q3L8U1 2897 aa18.48■□□□□ 0.55
CACNB3-220ENST00000551716 MYADML2A6NDP7 307 aa18.47■□□□□ 0.55
CACNB3-220ENST00000551716 GPR37L1O60883 481 aa18.47■□□□□ 0.55
CACNB3-220ENST00000551716 OTOP2Q7RTS6 562 aa18.47■□□□□ 0.55
CACNB3-220ENST00000551716 HIPK3Q9H422 1215 aa18.47■□□□□ 0.55
CACNB3-220ENST00000551716 ANTXR1Q9H6X2 564 aa18.47■□□□□ 0.55
CACNB3-220ENST00000551716 DCP1AQ9NPI6 582 aaPredicted RBP18.47■□□□□ 0.55
CACNB3-220ENST00000551716 PLXNA1Q9UIW2 1896 aa18.47■□□□□ 0.55
CACNB3-220ENST00000551716 DNAJC25-GNG10A0A024R161 153 aa18.46■□□□□ 0.55
CACNB3-220ENST00000551716 KCNQ1P51787 676 aa18.46■□□□□ 0.55
CACNB3-220ENST00000551716 NKX3-2P78367 333 aa18.46■□□□□ 0.55
CACNB3-220ENST00000551716 CCDC144BQ3MJ40 725 aa18.46■□□□□ 0.55
CACNB3-220ENST00000551716 SLC9C2Q5TAH2 1124 aa18.46■□□□□ 0.55
CACNB3-220ENST00000551716 AMOTL1Q8IY63 956 aa18.46■□□□□ 0.55
CACNB3-220ENST00000551716 EAF2Q96CJ1 260 aaPredicted RBP18.46■□□□□ 0.55
CACNB3-220ENST00000551716 FBXO28Q9NVF7 368 aa18.46■□□□□ 0.55
CACNB3-220ENST00000551716 EEF2P13639 858 aaKnown RBP18.45■□□□□ 0.54
CACNB3-220ENST00000551716 AKR1B1P15121 316 aa18.45■□□□□ 0.54
CACNB3-220ENST00000551716 SLC43A3Q8NBI5 491 aa18.45■□□□□ 0.54
CACNB3-220ENST00000551716 REPS2Q8NFH8 660 aa18.45■□□□□ 0.54
CACNB3-220ENST00000551716 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.45■□□□□ 0.54
CACNB3-220ENST00000551716 TLR7Q9NYK1 1049 aaKnown RBP18.45■□□□□ 0.54
CACNB3-220ENST00000551716 ZNFX1Q9P2E3 1918 aaKnown RBP18.45■□□□□ 0.54
CACNB3-220ENST00000551716 TRIM27P14373 513 aa18.44■□□□□ 0.54
CACNB3-220ENST00000551716 SNRNP48Q6IEG0 339 aaKnown RBP18.44■□□□□ 0.54
CACNB3-220ENST00000551716 SLF1Q9BQI6 1058 aa18.44■□□□□ 0.54
CACNB3-220ENST00000551716 ATP8A2Q9NTI2 1148 aa18.44■□□□□ 0.54
CACNB3-220ENST00000551716 MTCH2Q9Y6C9 303 aa18.44■□□□□ 0.54
CACNB3-220ENST00000551716 ATP2A1O14983 1001 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 TLL1O43897 1013 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 ZEB2O60315 1214 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 PFKMP08237 780 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 PDE6AP16499 860 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 ATP2A2P16615 1042 aaKnown RBP18.43■□□□□ 0.54
CACNB3-220ENST00000551716 RABGGTBP53611 331 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 TMEM67Q5HYA8 995 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 CLEC10AQ8IUN9 316 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 PRPF38AQ8NAV1 312 aaKnown RBP18.43■□□□□ 0.54
CACNB3-220ENST00000551716 SDR42E1Q8WUS8 393 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 FBXO40Q9UH90 709 aa18.43■□□□□ 0.54
CACNB3-220ENST00000551716 CTDP1Q9Y5B0 961 aaPredicted RBP18.43■□□□□ 0.54
CACNB3-220ENST00000551716 RAD21O60216 631 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 ZBED4O75132 1171 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 BCAR3O75815 825 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 CYP2D6P10635 497 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 CDK8P49336 464 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 EVX2Q03828 476 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 FAM83BQ5T0W9 1011 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.42■□□□□ 0.54
CACNB3-220ENST00000551716 ANKRD35Q8N283 1001 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 HLA-CQ95604 372 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 DDRGK1Q96HY6 314 aa18.42■□□□□ 0.54
CACNB3-220ENST00000551716 XIRP2A4UGR9 3374 aa18.41■□□□□ 0.54
CACNB3-220ENST00000551716 ZBBXA8MT70 800 aa18.41■□□□□ 0.54
CACNB3-220ENST00000551716 CCL23P55773 120 aa18.41■□□□□ 0.54
CACNB3-220ENST00000551716 ITGA7Q13683 1181 aa18.41■□□□□ 0.54
CACNB3-220ENST00000551716 C12orf60Q5U649 245 aa18.41■□□□□ 0.54
CACNB3-220ENST00000551716 NOL8Q76FK4 1167 aaKnown RBP18.41■□□□□ 0.54
CACNB3-220ENST00000551716 ERC1Q8IUD2 1116 aa18.41■□□□□ 0.54
CACNB3-220ENST00000551716 NOC4LQ9BVI4 516 aaKnown RBP18.41■□□□□ 0.54
CACNB3-220ENST00000551716 ZNF532Q9HCE3 1301 aa18.41■□□□□ 0.54
CACNB3-220ENST00000551716 CTAGE5O15320 804 aa18.4■□□□□ 0.54
CACNB3-220ENST00000551716 MYOGP15173 224 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms