RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 TOP1P11387 765 aaKnown RBP9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 GSTO1P78417 241 aa9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 NFIAQ12857 509 aa9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 SPECC1Q5M775 1068 aa9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 PRAMEF18Q5VWM3 479 aa9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 TRIM65Q6PJ69 517 aa9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 REXO1L1PQ8IX06 675 aa9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 PRMT6Q96LA8 375 aaPredicted RBP9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 GTPBP4Q9BZE4 634 aaKnown RBP9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 CRNKL1Q9BZJ0 848 aaKnown RBP9.23□□□□□ -0.93
RAB3IP-215ENST00000551641 ASTN2O75129 1339 aaPredicted RBP9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 ARHGAP6O43182 974 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 ERCC5P28715 1186 aaPredicted RBP9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 FMR1Q06787 632 aaKnown RBP eCLIP9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 NBPF9Q3BBW0 867 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 KMT5BQ4FZB7 885 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 DLK2Q6UY11 383 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 SYT10Q6XYQ8 523 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 SH3RF1Q7Z6J0 888 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 MICALL2Q8IY33 904 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 ENAHQ8N8S7 591 aaPredicted RBP9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 SMARCE1Q969G3 411 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 DYNLL2Q96FJ2 89 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 MED15Q96RN5 788 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 ZSCAN10Q96SZ4 725 aaPredicted RBP9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 FAM205AQ6ZU69 1335 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 SPDYE4A6NLX3 237 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 DLGAP5Q15398 846 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 ZFPM1Q8IX07 1006 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 CMTR1Q8N1G2 835 aaKnown RBP9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 NUP133Q8WUM0 1156 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 CSRNP2Q9H175 543 aa9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 RBM28Q9NW13 759 aaKnown RBP9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 PDS5AQ29RF7 1337 aaKnown RBP9.22□□□□□ -0.93
RAB3IP-215ENST00000551641 LRRC37AA6NMS7 1700 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 ZBTB22O15209 634 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 BMP15O95972 392 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 XBP1P17861 261 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 EPS15P42566 896 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 TROAPQ12815 778 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 SLC44A5Q8NCS7 719 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 TNFRSF25Q93038 417 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 CABP5Q9NP86 173 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 CNOT7Q9UIV1 285 aaKnown RBP9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 NFE2L3Q9Y4A8 694 aa9.21□□□□□ -0.93
RAB3IP-215ENST00000551641 TRIM75PA6NK02 468 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 FANCGO15287 622 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 STX10O60499 249 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 DDAH1O94760 285 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 CALM1P0DP23 149 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 CALM2P0DP24 149 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 CALM3P0DP25 149 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 H2AFXP16104 143 aaPredicted RBP9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 KRT2P35908 639 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 PLCD1P51178 756 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 PRKG1Q13976 671 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 TNIP1Q15025 636 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 ELF2Q15723 593 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 NPY5RQ15761 445 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 CDC42EP5Q6NZY7 148 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 FBXO38Q6PIJ6 1188 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 USP49Q70CQ1 688 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 HDAC9Q9UKV0 1011 aa9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.21□□□□□ -0.94
RAB3IP-215ENST00000551641 SNED1Q8TER0 1413 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 ZSCAN12O43309 604 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 NR1I3Q14994 352 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 EAPPQ56P03 285 aaPredicted RBP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 EARS2Q5JPH6 523 aaKnown RBP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 SPECC1LQ69YQ0 1117 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 CCDC82Q8N4S0 544 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 TC2NQ8N9U0 490 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 FERMT2Q96AC1 680 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 DCP1AQ9NPI6 582 aaPredicted RBP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 DDX4Q9NQI0 724 aaKnown RBP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 PRDM10Q9NQV6 1147 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 CCDC88AQ3V6T2 1871 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 KIF13BQ9NQT8 1826 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 KIAA1551Q9HCM1 1747 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 A0A087X0B3 334 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 A0A1B0GTH6 734 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 RAD21O60216 631 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 VIL1P09327 827 aaKnown RBP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 GRIPAP1Q4V328 841 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 FAM47AQ5JRC9 791 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 APOBEC3HQ6NTF7 200 aaKnown RBP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 TMED8Q6PL24 325 aaPredicted RBP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 APTXQ7Z2E3 356 aaKnown RBP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 CATIPQ7Z7H3 387 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 SLF2Q8IX21 1173 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 SRRTQ9BXP5 876 aaKnown RBP9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 VPS54Q9P1Q0 977 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 FZD1Q9UP38 647 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 MYH2Q9UKX2 1941 aa9.2□□□□□ -0.94
RAB3IP-215ENST00000551641 LTBP1Q14766 1721 aa9.19□□□□□ -0.94
RAB3IP-215ENST00000551641 VWA3AA6NCI4 1184 aa9.19□□□□□ -0.94
RAB3IP-215ENST00000551641 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 317.5 ms