RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	AKNAD1	Q5T1N1	836 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	SLFN13	Q68D06	897 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	SPICE1	Q8N0Z3	855 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	DCAF4	Q8WV16	495 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	DDX11	Q96FC9	970 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	CEP95	Q96GE4	821 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	UNC93B1	Q9H1C4	597 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	PORCN	Q9H237	461 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	TOMM22	Q9NS69	142 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	BTBD7	Q9P203	1132 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	OGDHL	Q9ULD0	1010 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	STX8	Q9UNK0	236 aa		10.66	□□□□□ -0.7
ATXN2-223	ENST00000551551	CYP2D7	A0A087X1C5	515 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	EVI5	O60447	810 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	GABBR2	O75899	941 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	NDUFB10	O96000	172 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	ADORA2A	P29274	412 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	NOV	P48745	357 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	SLFNL1	Q499Z3	407 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	GPATCH4	Q5T3I0	446 aa	Known RBP	10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	CASC1	Q6TDU7	716 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	SEC62	Q99442	399 aa	Known RBP	10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	MMP19	Q99542	508 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	SLC38A10	Q9HBR0	1119 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	CNPY2	Q9Y2B0	182 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	NAV1	Q8NEY1	1877 aa		10.65	□□□□□ -0.7
ATXN2-223	ENST00000551551	SIPA1L1	O43166	1804 aa		10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	SEPT4	O43236	478 aa		10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	CNMD	O75829	334 aa		10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	CACNB2	Q08289	660 aa	Predicted RBP	10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	IK	Q13123	557 aa	Predicted RBP	10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	TMEM132B	Q14DG7	1078 aa		10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	SART3	Q15020	963 aa	Known RBP	10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	FAM83B	Q5T0W9	1011 aa		10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	CWC27	Q6UX04	472 aa	Known RBP	10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	KIAA1211	Q6ZU35	1233 aa		10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	UBE2Q1	Q7Z7E8	422 aa		10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	SEZ6L	Q9BYH1	1024 aa		10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	RBBP6	Q7Z6E9	1792 aa	Known RBP	10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	MGAM	O43451	1857 aa		10.64	□□□□□ -0.71
ATXN2-223	ENST00000551551	PFAS	O15067	1338 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	SYNGAP1	Q96PV0	1343 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551		A0A1W2PPC1	479 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	EIF5B	O60841	1220 aa	Known RBP	10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	MYC	P01106	439 aa	Predicted RBP	10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	NMI	Q13287	307 aa	Predicted RBP	10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	MAMDC4	Q6UXC1	1216 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	ANKRD35	Q8N283	1001 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	TMTC2	Q8N394	836 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	TRIB2	Q92519	343 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	ATG4C	Q96DT6	458 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	FAM227B	Q96M60	508 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	MTA3	Q9BTC8	594 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	SPC25	Q9HBM1	224 aa		10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	DDX20	Q9UHI6	824 aa	Known RBP	10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	ZNF214	Q9UL59	606 aa	Predicted RBP	10.63	□□□□□ -0.71
ATXN2-223	ENST00000551551	DDX60L	Q5H9U9	1706 aa	Known RBP	10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	ERICH2	A1L162	156 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	ASB14	A6NK59	587 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	TMEM232	C9JQI7	657 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	DNM1L	O00429	736 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	PRDM1	O75626	825 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	CNGA1	P29973	690 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	FAM47A	Q5JRC9	791 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	TTC22	Q5TAA0	569 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	SNRNP48	Q6IEG0	339 aa	Known RBP	10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	BTNL9	Q6UXG8	535 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	RNF180	Q86T96	592 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	SAMD3	Q8N6K7	520 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	ANKS1A	Q92625	1134 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	KIFC2	Q96AC6	838 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	TINF2	Q9BSI4	451 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	UBAC1	Q9BSL1	405 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	ABHD16B	Q9H3Z7	469 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	C11orf49	Q9H6J7	331 aa		10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551	ADD3	Q9UEY8	706 aa	Known RBP	10.62	□□□□□ -0.71
ATXN2-223	ENST00000551551		A0A0D9SFI3	127 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	KBTBD13	C9JR72	458 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	CHGB	P05060	677 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	RARB	P10826	455 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	MCC	P23508	829 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	RRP12	Q5JTH9	1297 aa	Known RBP	10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	STK11IP	Q8N1F8	1099 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	RGS22	Q8NE09	1264 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	PAWR	Q96IZ0	340 aa	Known RBP	10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	MAML3	Q96JK9	1138 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	TSEN34	Q9BSV6	310 aa	Known RBP	10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	ACAD9	Q9H845	621 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	MAP3K20	Q9NYL2	800 aa	Known RBP	10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	FAM184B	Q9ULE4	1060 aa		10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	ISY1	Q9ULR0	285 aa	Known RBP	10.61	□□□□□ -0.71
ATXN2-223	ENST00000551551	KIAA0100	Q14667	2235 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms