RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CRISPLD2Q9H0B8 497 aa22.42■■□□□ 1.18
DDX54-208ENST00000551344 CTDP1Q9Y5B0 961 aaPredicted RBP22.42■■□□□ 1.18
DDX54-208ENST00000551344 MCCP23508 829 aa22.41■■□□□ 1.18
DDX54-208ENST00000551344 RCSD1Q6JBY9 416 aa22.41■■□□□ 1.18
DDX54-208ENST00000551344 FAM160B2Q86V87 743 aa22.41■■□□□ 1.18
DDX54-208ENST00000551344 TBC1D10CQ8IV04 446 aa22.41■■□□□ 1.18
DDX54-208ENST00000551344 NPLOC4Q8TAT6 608 aa22.41■■□□□ 1.18
DDX54-208ENST00000551344 KIFC2Q96AC6 838 aa22.41■■□□□ 1.18
DDX54-208ENST00000551344 TEX13BQ9BXU2 312 aa22.41■■□□□ 1.18
DDX54-208ENST00000551344 PARP14Q460N5 1801 aa22.41■■□□□ 1.18
DDX54-208ENST00000551344 TNRC18O15417 2968 aaPredicted RBP22.4■■□□□ 1.18
DDX54-208ENST00000551344 TMEM232C9JQI7 657 aa22.4■■□□□ 1.18
DDX54-208ENST00000551344 TOP1P11387 765 aaKnown RBP22.4■■□□□ 1.18
DDX54-208ENST00000551344 STAT2P52630 851 aa22.4■■□□□ 1.18
DDX54-208ENST00000551344 SLC38A10Q9HBR0 1119 aa22.4■■□□□ 1.18
DDX54-208ENST00000551344 FLRT1Q9NZU1 646 aa22.4■■□□□ 1.18
DDX54-208ENST00000551344 COBLO75128 1261 aa22.39■■□□□ 1.17
DDX54-208ENST00000551344 IGHA2P01877 340 aa22.39■■□□□ 1.17
DDX54-208ENST00000551344 OAZ1P54368 228 aa22.39■■□□□ 1.17
DDX54-208ENST00000551344 OLFML2BQ68BL8 750 aa22.39■■□□□ 1.17
DDX54-208ENST00000551344 UBE2Q1Q7Z7E8 422 aa22.39■■□□□ 1.17
DDX54-208ENST00000551344 TMEM47Q9BQJ4 181 aa22.39■■□□□ 1.17
DDX54-208ENST00000551344 IL25Q9H293 177 aa22.39■■□□□ 1.17
DDX54-208ENST00000551344 MKI67P46013 3256 aaKnown RBP22.38■■□□□ 1.17
DDX54-208ENST00000551344 KCTD2Q14681 263 aa22.38■■□□□ 1.17
DDX54-208ENST00000551344 CCDC178Q5BJE1 867 aa22.38■■□□□ 1.17
DDX54-208ENST00000551344 SNRNP48Q6IEG0 339 aaKnown RBP22.38■■□□□ 1.17
DDX54-208ENST00000551344 CPXCR1Q8N123 301 aa22.38■■□□□ 1.17
DDX54-208ENST00000551344 DCAF4Q8WV16 495 aa22.38■■□□□ 1.17
DDX54-208ENST00000551344 MMP19Q99542 508 aa22.38■■□□□ 1.17
DDX54-208ENST00000551344 ISY1Q9ULR0 285 aaKnown RBP22.38■■□□□ 1.17
DDX54-208ENST00000551344 PRPF38BQ5VTL8 546 aaKnown RBP22.37■■□□□ 1.17
DDX54-208ENST00000551344 KCTD1Q719H9 257 aa22.37■■□□□ 1.17
DDX54-208ENST00000551344 DGKHQ86XP1 1220 aa22.37■■□□□ 1.17
DDX54-208ENST00000551344 ANKLE1Q8NAG6 615 aa22.37■■□□□ 1.17
DDX54-208ENST00000551344 DIS3Q9Y2L1 958 aaKnown RBP22.37■■□□□ 1.17
DDX54-208ENST00000551344 NEDD4P46934 1319 aa22.36■■□□□ 1.17
DDX54-208ENST00000551344 SGSM2O43147 1006 aa22.36■■□□□ 1.17
DDX54-208ENST00000551344 FARP2O94887 1054 aaPredicted RBP22.36■■□□□ 1.17
DDX54-208ENST00000551344 IKQ13123 557 aaPredicted RBP22.36■■□□□ 1.17
DDX54-208ENST00000551344 IQCA1Q86XH1 822 aa22.36■■□□□ 1.17
DDX54-208ENST00000551344 KRT23Q9C075 422 aa22.36■■□□□ 1.17
DDX54-208ENST00000551344 CNNM2Q9H8M5 875 aa22.36■■□□□ 1.17
DDX54-208ENST00000551344 RAVER2Q9HCJ3 691 aaKnown RBP22.36■■□□□ 1.17
DDX54-208ENST00000551344 OGDHLQ9ULD0 1010 aa22.36■■□□□ 1.17
DDX54-208ENST00000551344 RIPK3Q9Y572 518 aa22.36■■□□□ 1.17
DDX54-208ENST00000551344 COL11A1P12107 1806 aaPredicted RBP22.36■■□□□ 1.17
DDX54-208ENST00000551344 KDM4AO75164 1064 aa22.35■■□□□ 1.17
DDX54-208ENST00000551344 CCND3P30281 292 aaPredicted RBP22.35■■□□□ 1.17
DDX54-208ENST00000551344 CYP2C19P33261 490 aa22.35■■□□□ 1.17
DDX54-208ENST00000551344 CHST13Q8NET6 341 aa22.35■■□□□ 1.17
DDX54-208ENST00000551344 FBXO40Q9UH90 709 aa22.35■■□□□ 1.17
DDX54-208ENST00000551344 ZNF236Q9UL36 1845 aa22.34■■□□□ 1.17
DDX54-208ENST00000551344 ZNF792Q3KQV3 632 aa22.34■■□□□ 1.17
DDX54-208ENST00000551344 BTNL9Q6UXG8 535 aa22.34■■□□□ 1.17
DDX54-208ENST00000551344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.34■■□□□ 1.17
DDX54-208ENST00000551344 ANKS1AQ92625 1134 aa22.34■■□□□ 1.17
DDX54-208ENST00000551344 CHMP4CQ96CF2 233 aa22.34■■□□□ 1.17
DDX54-208ENST00000551344 MAML3Q96JK9 1138 aa22.34■■□□□ 1.17
DDX54-208ENST00000551344 HTATIP2Q9BUP3 242 aa22.34■■□□□ 1.17
DDX54-208ENST00000551344 ZSWIM5Q9P217 1185 aa22.34■■□□□ 1.17
DDX54-208ENST00000551344 MTMR7Q9Y216 660 aa22.34■■□□□ 1.17
DDX54-208ENST00000551344 B4E1Z4 1266 aa22.33■■□□□ 1.17
DDX54-208ENST00000551344 MSCO60682 206 aa22.33■■□□□ 1.17
DDX54-208ENST00000551344 SLC4A3P48751 1232 aa22.33■■□□□ 1.17
DDX54-208ENST00000551344 CCDC96Q2M329 555 aa22.33■■□□□ 1.17
DDX54-208ENST00000551344 LHX8Q68G74 356 aa22.33■■□□□ 1.17
DDX54-208ENST00000551344 DDX11Q96FC9 970 aa22.33■■□□□ 1.17
DDX54-208ENST00000551344 PRR12Q9ULL5 1215 aa22.33■■□□□ 1.17
DDX54-208ENST00000551344 U3KPZ7 1027 aaPredicted RBP22.33■■□□□ 1.17
DDX54-208ENST00000551344 PGK2P07205 417 aa22.32■■□□□ 1.16
DDX54-208ENST00000551344 PDHBP11177 359 aa22.32■■□□□ 1.16
DDX54-208ENST00000551344 PTH1RQ03431 593 aa22.32■■□□□ 1.16
DDX54-208ENST00000551344 NECAB2Q7Z6G3 386 aa22.32■■□□□ 1.16
DDX54-208ENST00000551344 ZSCAN10Q96SZ4 725 aaPredicted RBP22.32■■□□□ 1.16
DDX54-208ENST00000551344 ZKSCAN3Q9BRR0 538 aa22.32■■□□□ 1.16
DDX54-208ENST00000551344 ZNFX1Q9P2E3 1918 aaKnown RBP22.31■■□□□ 1.16
DDX54-208ENST00000551344 SNHG28P0DPA3 235 aa22.31■■□□□ 1.16
DDX54-208ENST00000551344 CYBAP13498 195 aa22.31■■□□□ 1.16
DDX54-208ENST00000551344 CNGA1P29973 690 aa22.31■■□□□ 1.16
DDX54-208ENST00000551344 TKFCQ3LXA3 575 aa22.31■■□□□ 1.16
DDX54-208ENST00000551344 MAP4K1Q92918 833 aa22.31■■□□□ 1.16
DDX54-208ENST00000551344 PAWRQ96IZ0 340 aaKnown RBP22.31■■□□□ 1.16
DDX54-208ENST00000551344 CCDC136Q96JN2 1154 aa22.31■■□□□ 1.16
DDX54-208ENST00000551344 NRBP1Q9UHY1 535 aa22.31■■□□□ 1.16
DDX54-208ENST00000551344 ZNF536O15090 1300 aa22.31■■□□□ 1.16
DDX54-208ENST00000551344 DNAJC25-GNG10A0A024R161 153 aa22.3■■□□□ 1.16
DDX54-208ENST00000551344 TRDNQ13061 729 aa22.3■■□□□ 1.16
DDX54-208ENST00000551344 BMP2KLQ5H9B9 411 aa22.3■■□□□ 1.16
DDX54-208ENST00000551344 TTBK2Q6IQ55 1244 aa22.3■■□□□ 1.16
DDX54-208ENST00000551344 RASGRP2Q7LDG7 609 aa22.3■■□□□ 1.16
DDX54-208ENST00000551344 ANKRD35Q8N283 1001 aa22.3■■□□□ 1.16
DDX54-208ENST00000551344 MSL3Q8N5Y2 521 aaKnown RBP22.3■■□□□ 1.16
DDX54-208ENST00000551344 TRPV1Q8NER1 839 aa22.3■■□□□ 1.16
DDX54-208ENST00000551344 DPF3Q92784 378 aa22.3■■□□□ 1.16
DDX54-208ENST00000551344 TINF2Q9BSI4 451 aa22.3■■□□□ 1.16
DDX54-208ENST00000551344 DDX20Q9UHI6 824 aaKnown RBP22.3■■□□□ 1.16
DDX54-208ENST00000551344 CYP21A2P08686 494 aa22.29■■□□□ 1.16
DDX54-208ENST00000551344 ZNF543Q08ER8 600 aa22.29■■□□□ 1.16
DDX54-208ENST00000551344 SYDE2Q5VT97 1194 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms