RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ERLIN1O75477 346 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 NEBLO76041 1014 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 SNUPNO95149 360 aaKnown RBP6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 PDCP20941 246 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 SFPQP23246 707 aaKnown RBP eCLIP6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 MPSTP25325 297 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 INPP5BP32019 993 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 RAB27AP51159 221 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 DRP2Q13474 957 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 KIF4BQ2VIQ3 1234 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 TUBB8Q3ZCM7 444 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 C6orf89Q6UWU4 347 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 TAX1BP1Q86VP1 789 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 IQCA1Q86XH1 822 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 TREML1Q86YW5 311 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 TSPYL6Q8N831 410 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 CEP112Q8N8E3 955 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 KLHL23Q8NBE8 558 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 OR8K1Q8NGG5 319 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 N4BP2L2Q92802 583 aaPredicted RBP6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 XPO4Q9C0E2 1151 aaKnown RBP6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 FAM204AQ9H8W3 233 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 CDC23Q9UJX2 597 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 ODF2LQ9ULJ1 636 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 MTMR7Q9Y216 660 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 PPP2R2CQ9Y2T4 447 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 GJA3Q9Y6H8 435 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 IVNS1ABPQ9Y6Y0 642 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 ABCC6O95255 1503 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 ZCCHC11Q5TAX3 1644 aaKnown RBP6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 KDM6AO15550 1401 aaPredicted RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 MPHOSPH10O00566 681 aaKnown RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 OPLAHO14841 1288 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 MEFVO15553 781 aaPredicted RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 MICAL2O94851 1124 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 SASH1O94885 1247 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 ABL1P00519 1130 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 EPB41P11171 864 aaKnown RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 PECAM1P16284 738 aaPredicted RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 NF2P35240 595 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 GMPRP36959 345 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 IDH3AP50213 366 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 KCNQ4P56696 695 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 ACTN3Q08043 901 aaPredicted RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 PPFIA1Q13136 1202 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 GRIN2CQ14957 1233 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 SETDB1Q15047 1291 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 PDCD2Q16342 344 aaPredicted RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 ME3Q16798 604 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 AP1ARQ63HQ0 302 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 WWC2Q6AWC2 1192 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 ATL3Q6DD88 541 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 VSTM4Q8IW00 320 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 RBM12BQ8IXT5 1001 aaKnown RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 CEP57L1Q8IYX8 460 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 DHX58Q96C10 678 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 COL25A1Q9BXS0 654 aaPredicted RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 ACBD3Q9H3P7 528 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 VCPKMTQ9H867 229 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 KAT14Q9H8E8 782 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 CD248Q9HCU0 757 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 BRD7Q9NPI1 651 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 ANO2Q9NQ90 1003 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 DDX20Q9UHI6 824 aaKnown RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 HPCAL4Q9UM19 191 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 CDC42BPBQ9Y5S2 1711 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 CHD2O14647 1828 aaKnown RBP6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 ATP10BO94823 1461 aa6.01□□□□□ -1.45
LSM3P2-201ENST00000551246 A0A1B0GUA9 196 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 A0A1W2PQ27 194 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 A0A1W2PQ64 194 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 A0A1W2PQD8 194 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 A6NHS1 94 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 SOWAHDA6NJG2 315 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 H3BRB1 525 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 PDLIM1O00151 329 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 BIN1O00499 593 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 LIN7AO14910 233 aaPredicted RBP6□□□□□ -1.45
LSM3P2-201ENST00000551246 KHNYNO15037 678 aaKnown RBP6□□□□□ -1.45
LSM3P2-201ENST00000551246 AHCYL1O43865 530 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 MGRN1O60291 552 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 FESP07332 822 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 FGFR3P22607 806 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 ARHGAP25P42331 645 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 CD151P48509 253 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 CCT5P48643 541 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 CHMP4BP1P59074 171 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 VSNL1P62760 191 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 FKBP4Q02790 459 aaKnown RBP eCLIP6□□□□□ -1.45
LSM3P2-201ENST00000551246 SFSWAPQ12872 951 aaKnown RBP6□□□□□ -1.45
LSM3P2-201ENST00000551246 LAMC2Q13753 1193 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 NFE2L2Q16236 605 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 CCDC96Q2M329 555 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 FILIP1LQ4L180 1135 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 FAM182BQ5T319 152 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 B4GALNT4Q76KP1 1039 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 CDC37L1Q7L3B6 337 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 TMC6Q7Z403 805 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 UNC5CLQ8IV45 518 aa6□□□□□ -1.45
LSM3P2-201ENST00000551246 CCDC50Q8IVM0 306 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms