RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 VWA5AO00534 786 aa12.41□□□□□ -0.42
BEST3-210ENST00000551160 ERC2O15083 957 aa12.41□□□□□ -0.42
BEST3-210ENST00000551160 WDR46O15213 610 aaKnown RBP12.41□□□□□ -0.42
BEST3-210ENST00000551160 DUSP11O75319 330 aaKnown RBP12.41□□□□□ -0.42
BEST3-210ENST00000551160 STAT3P40763 770 aa12.41□□□□□ -0.42
BEST3-210ENST00000551160 AAK1Q2M2I8 961 aa12.41□□□□□ -0.42
BEST3-210ENST00000551160 REPS2Q8NFH8 660 aa12.41□□□□□ -0.42
BEST3-210ENST00000551160 KHSRPQ92945 711 aaKnown RBP eCLIP12.41□□□□□ -0.42
BEST3-210ENST00000551160 DYNLL2Q96FJ2 89 aa12.41□□□□□ -0.42
BEST3-210ENST00000551160 CCDC8Q9H0W5 538 aaPredicted RBP12.41□□□□□ -0.42
BEST3-210ENST00000551160 MTIF3Q9H2K0 278 aaKnown RBP12.41□□□□□ -0.42
BEST3-210ENST00000551160 C11orf16Q9NQ32 467 aa12.41□□□□□ -0.42
BEST3-210ENST00000551160 ZNF214Q9UL59 606 aaPredicted RBP12.41□□□□□ -0.42
BEST3-210ENST00000551160 SMCHD1A6NHR9 2005 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 XIRP2A4UGR9 3374 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 RFXAPO00287 272 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 CD4P01730 458 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 FGBP02675 491 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 POLA2Q14181 598 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 SDR42E1Q8WUS8 393 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 UPF3AQ9H1J1 476 aaKnown RBP12.4□□□□□ -0.42
BEST3-210ENST00000551160 HIPK3Q9H422 1215 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 ARHGEF10LQ9HCE6 1279 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 PPP1R9AQ9ULJ8 1098 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 PLXNA1Q9UIW2 1896 aa12.4□□□□□ -0.42
BEST3-210ENST00000551160 MAGEB6P1A0A0J9YX57 407 aa12.39□□□□□ -0.43
BEST3-210ENST00000551160 EPOPA6NHQ4 379 aa12.39□□□□□ -0.43
BEST3-210ENST00000551160 SMIM22K7EJ46 135 aa12.39□□□□□ -0.43
BEST3-210ENST00000551160 CTAGE5O15320 804 aa12.39□□□□□ -0.43
BEST3-210ENST00000551160 TLR3O15455 904 aaKnown RBP12.39□□□□□ -0.43
BEST3-210ENST00000551160 RARSP54136 660 aaKnown RBP12.39□□□□□ -0.43
BEST3-210ENST00000551160 CCL23P55773 120 aa12.39□□□□□ -0.43
BEST3-210ENST00000551160 KRT40Q6A162 431 aa12.39□□□□□ -0.43
BEST3-210ENST00000551160 TRMT2AQ8IZ69 625 aaKnown RBP12.39□□□□□ -0.43
BEST3-210ENST00000551160 MSL3Q8N5Y2 521 aaKnown RBP12.39□□□□□ -0.43
BEST3-210ENST00000551160 PCSK9Q8NBP7 692 aaKnown RBP12.39□□□□□ -0.43
BEST3-210ENST00000551160 EAF2Q96CJ1 260 aaPredicted RBP12.39□□□□□ -0.43
BEST3-210ENST00000551160 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
BEST3-210ENST00000551160 MTCH2Q9Y6C9 303 aa12.39□□□□□ -0.43
BEST3-210ENST00000551160 MYH1P12882 1939 aa12.39□□□□□ -0.43
BEST3-210ENST00000551160 TCF20Q9UGU0 1960 aaKnown RBP12.38□□□□□ -0.43
BEST3-210ENST00000551160 SURF6O75683 361 aaKnown RBP12.38□□□□□ -0.43
BEST3-210ENST00000551160 BCAR3O75815 825 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 CT47B1P0C2W7 299 aaPredicted RBP12.38□□□□□ -0.43
BEST3-210ENST00000551160 TRIM27P14373 513 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 GJA9P57773 515 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 BEX3Q00994 111 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 ACVR2BQ13705 512 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 GNASQ5JWF2 1037 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 FAM83BQ5T0W9 1011 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 MAMDC4Q6UXC1 1216 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 ALYREFQ86V81 257 aaKnown RBP12.38□□□□□ -0.43
BEST3-210ENST00000551160 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 VWCEQ96DN2 955 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 FGD4Q96M96 766 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 CRNKL1Q9BZJ0 848 aaKnown RBP12.38□□□□□ -0.43
BEST3-210ENST00000551160 WNT8AQ9H1J5 351 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 CERS4Q9HA82 394 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 DCP1AQ9NPI6 582 aaPredicted RBP12.38□□□□□ -0.43
BEST3-210ENST00000551160 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.38□□□□□ -0.43
BEST3-210ENST00000551160 PCDHA11Q9Y5I1 949 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 SLC4A7Q9Y6M7 1214 aa12.38□□□□□ -0.43
BEST3-210ENST00000551160 PRRC2BQ5JSZ5 2229 aaKnown RBP12.37□□□□□ -0.43
BEST3-210ENST00000551160 DNAJC25-GNG10A0A024R161 153 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 TLL1O43897 1013 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 RAD21O60216 631 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 EEF2P13639 858 aaKnown RBP12.37□□□□□ -0.43
BEST3-210ENST00000551160 PDE6AP16499 860 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 COPB2P35606 906 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 CCDC144BQ3MJ40 725 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 SNRNP48Q6IEG0 339 aaKnown RBP12.37□□□□□ -0.43
BEST3-210ENST00000551160 CXCL17Q6UXB2 119 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 LCORLQ8N3X6 602 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 SSH3Q8TE77 659 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 NOC4LQ9BVI4 516 aaKnown RBP12.37□□□□□ -0.43
BEST3-210ENST00000551160 SPC25Q9HBM1 224 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 SWAP70Q9UH65 585 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 RIPK3Q9Y572 518 aa12.37□□□□□ -0.43
BEST3-210ENST00000551160 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
BEST3-210ENST00000551160 CYP2D7A0A087X1C5 515 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 ZBBXA8MT70 800 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
BEST3-210ENST00000551160 GPR37L1O60883 481 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 ARHGEF15O94989 841 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 CA3P07451 260 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
BEST3-210ENST00000551160 PTGS1P23219 599 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 SLC43A3Q8NBI5 491 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 CLUAP1Q96AJ1 413 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 DDX11Q96FC9 970 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 NUP88Q99567 741 aaPredicted RBP12.36□□□□□ -0.43
BEST3-210ENST00000551160 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 TRPV6Q9H1D0 765 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 ASTN1O14525 1302 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 GRIN2DO15399 1336 aa12.36□□□□□ -0.43
BEST3-210ENST00000551160 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.35□□□□□ -0.43
BEST3-210ENST00000551160 PRKAB2O43741 272 aa12.35□□□□□ -0.43
BEST3-210ENST00000551160 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
BEST3-210ENST00000551160 TTLL4Q14679 1199 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms