RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 GOLGA8HP0CJ92 632 aa18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 SLC16A2P36021 539 aa18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 LIFRP42702 1097 aa18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 FCGRTP55899 365 aa18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 FGD1P98174 961 aa18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 MLLT1Q03111 559 aaPredicted RBP18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 PLS1Q14651 629 aa18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 GPATCH4Q5T3I0 446 aaKnown RBP18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 EFCC1Q9HA90 598 aa18.97■□□□□ 0.63
CHMP1A-209ENST00000550872 PARP1P09874 1014 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 RPS6KB1P23443 525 aa18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 CTGFP29279 349 aa18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 CCNA1P78396 465 aa18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 CAP1Q01518 475 aa18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 ASPRV1Q53RT3 343 aa18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 BTNL9Q6UXG8 535 aa18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 CTU1Q7Z7A3 348 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 NUP133Q8WUM0 1156 aa18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 TRIM17Q9Y577 477 aa18.96■□□□□ 0.63
CHMP1A-209ENST00000550872 PARP14Q460N5 1801 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 FDX1P10109 184 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 ANAPC15P60006 121 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 TMEM132BQ14DG7 1078 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 SYDE2Q5VT97 1194 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 ZNF654Q8IZM8 581 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 CPXCR1Q8N123 301 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 TRIM47Q96LD4 638 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 TM6SF1Q9BZW5 370 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 SPATC1LQ9H0A9 340 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 PRR12Q9ULL5 1215 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 CYP46A1Q9Y6A2 500 aa18.95■□□□□ 0.62
CHMP1A-209ENST00000550872 TNPO2O14787 897 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 HOXD10P28358 340 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 STAT3P40763 770 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 TROAPQ12815 778 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 GRM4Q14833 912 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 SYNE3Q6ZMZ3 975 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 Q6ZUG5 572 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 RUFY3Q7L099 469 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 OTOP1Q7RTM1 612 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 REPS2Q8NFH8 660 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 MYL10Q9BUA6 226 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 MOV10L1Q9BXT6 1211 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 UBA5Q9GZZ9 404 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 PORCNQ9H237 461 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 SLC38A10Q9HBR0 1119 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 CWC22Q9HCG8 908 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 SLC12A7Q9Y666 1083 aa18.94■□□□□ 0.62
CHMP1A-209ENST00000550872 DDAH1O94760 285 aa18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 GNRH1P01148 92 aa18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 MAPK4P31152 587 aa18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 SNAP25P60880 206 aa18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 WDR78Q5VTH9 848 aa18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 SGMS1Q86VZ5 419 aa18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 STAG2Q8N3U4 1231 aa18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 COA7Q96BR5 231 aa18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 UPF3BQ9BZI7 483 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 RAVER2Q9HCJ3 691 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-209ENST00000550872 DOCK3Q8IZD9 2030 aa18.92■□□□□ 0.62
CHMP1A-209ENST00000550872 KLRF2D3W0D1 207 aa18.92■□□□□ 0.62
CHMP1A-209ENST00000550872 CCDC174Q6PII3 467 aa18.92■□□□□ 0.62
CHMP1A-209ENST00000550872 NCAPG2Q86XI2 1143 aa18.92■□□□□ 0.62
CHMP1A-209ENST00000550872 CTCFLQ8NI51 663 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-209ENST00000550872 TEX13BQ9BXU2 312 aa18.92■□□□□ 0.62
CHMP1A-209ENST00000550872 CPVLQ9H3G5 476 aa18.92■□□□□ 0.62
CHMP1A-209ENST00000550872 MAD2L2Q9UI95 211 aa18.92■□□□□ 0.62
CHMP1A-209ENST00000550872 ZNF214Q9UL59 606 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-209ENST00000550872 ZSWIM8A7E2V4 1837 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 COL11A1P12107 1806 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 PALM3A6NDB9 673 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 ATP2A1O14983 1001 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 DHX16O60231 1041 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 SLC25A27O95847 323 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 CALM1P0DP23 149 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 CALM2P0DP24 149 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 CALM3P0DP25 149 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 ERCC3P19447 782 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 RXRAP19793 462 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 SNRNP48Q6IEG0 339 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 GPR142Q7Z601 462 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 PLEKHH3Q7Z736 793 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 RAB11FIP4Q86YS3 637 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 RIOX2Q8IUF8 465 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 SHCBP1Q8NEM2 672 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 BRF1Q92994 677 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 MAP3K14Q99558 947 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 UPF2Q9HAU5 1272 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 VAT1LQ9HCJ6 419 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 PDRG1Q9NUG6 133 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 SRRDQ9UH36 339 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 BRPF3Q9ULD4 1205 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 NAP1L2Q9ULW6 460 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 A0A0G2JMZ2 1700 aa18.91■□□□□ 0.62
CHMP1A-209ENST00000550872 MGAMO43451 1857 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 KLF18A0A0U1RQI7 1052 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 KIF5BP33176 963 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 OAZ1P54368 228 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 APOBRQ0VD83 1088 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms