RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 TOP1P11387 765 aaKnown RBP14.13□□□□□ -0.15
ERBB3-216ENST00000550869 SPP2Q13103 211 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 SEPT2Q15019 361 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 SH3D19Q5HYK7 790 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 TREML2Q5T2D2 321 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 ANKRD13CQ8N6S4 541 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 INTS4Q96HW7 963 aaKnown RBP14.13□□□□□ -0.15
ERBB3-216ENST00000550869 MAP3K14Q99558 947 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 TMEM47Q9BQJ4 181 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 UNC93B1Q9H1C4 597 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 CABP5Q9NP86 173 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 FAM217BQ9NTX9 383 aaPredicted RBP14.13□□□□□ -0.15
ERBB3-216ENST00000550869 ZBTB21Q9ULJ3 1066 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 DOCK3Q8IZD9 2030 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 MYH4Q9Y623 1939 aa14.13□□□□□ -0.15
ERBB3-216ENST00000550869 DDAH1O94760 285 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 GDF11O95390 407 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 TTLL1O95922 423 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 ASNSP08243 561 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 SCRN1Q12765 414 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 PPP2R5BQ15173 497 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 ZNF654Q8IZM8 581 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 GTF3C6Q969F1 213 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 PAK6Q9NQU5 681 aaPredicted RBP14.12□□□□□ -0.15
ERBB3-216ENST00000550869 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.12□□□□□ -0.15
ERBB3-216ENST00000550869 SLC12A7Q9Y666 1083 aa14.12□□□□□ -0.15
ERBB3-216ENST00000550869 TRIOBPQ9H2D6 2365 aa14.11□□□□□ -0.15
ERBB3-216ENST00000550869 CCDC69A6NI79 296 aa14.11□□□□□ -0.15
ERBB3-216ENST00000550869 ZBTB43O43298 467 aa14.11□□□□□ -0.15
ERBB3-216ENST00000550869 SNHG28P0DPA3 235 aa14.11□□□□□ -0.15
ERBB3-216ENST00000550869 EEF2P13639 858 aaKnown RBP14.11□□□□□ -0.15
ERBB3-216ENST00000550869 ELNP15502 786 aa14.11□□□□□ -0.15
ERBB3-216ENST00000550869 HMGCS2P54868 508 aa14.11□□□□□ -0.15
ERBB3-216ENST00000550869 NOL8Q76FK4 1167 aaKnown RBP14.11□□□□□ -0.15
ERBB3-216ENST00000550869 CCDC84Q86UT8 332 aaPredicted RBP14.11□□□□□ -0.15
ERBB3-216ENST00000550869 SLKQ9H2G2 1235 aaPredicted RBP14.11□□□□□ -0.15
ERBB3-216ENST00000550869 MPHOSPH10O00566 681 aaKnown RBP14.1□□□□□ -0.15
ERBB3-216ENST00000550869 HMGCRP04035 888 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 CALM1P0DP23 149 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 CALM2P0DP24 149 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 CALM3P0DP25 149 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 SLC4A3P48751 1232 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 ICA1Q05084 483 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 NTRK3Q16288 839 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 CATIPQ7Z7H3 387 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 CLEC10AQ8IUN9 316 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 FANCBQ8NB91 859 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 PNMA1Q8ND90 353 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 CHMP4CQ96CF2 233 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 LLPHQ9BRT6 129 aaKnown RBP14.1□□□□□ -0.15
ERBB3-216ENST00000550869 ASCC2Q9H1I8 757 aaPredicted RBP14.1□□□□□ -0.15
ERBB3-216ENST00000550869 KAT14Q9H8E8 782 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 CLIP2Q9UDT6 1046 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 STX8Q9UNK0 236 aa14.1□□□□□ -0.15
ERBB3-216ENST00000550869 A0A1W2PRG0 241 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 GOLGA8BA8MQT2 603 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 C19orf81C9J6K1 198 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 CTDNEP1O95476 244 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 TFRCP02786 760 aaKnown RBP14.09□□□□□ -0.15
ERBB3-216ENST00000550869 CDC27P30260 824 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 HOXA7P31268 230 aaPredicted RBP14.09□□□□□ -0.15
ERBB3-216ENST00000550869 BACE1P56817 501 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 SYNE3Q6ZMZ3 975 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 ANKLE1Q8NAG6 615 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 SMARCC2Q8TAQ2 1214 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 GTF3C2Q8WUA4 911 aaPredicted RBP14.09□□□□□ -0.15
ERBB3-216ENST00000550869 DEFB118Q96PH6 123 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 MYL10Q9BUA6 226 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 CRISPLD2Q9H0B8 497 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 TMOD4Q9NZQ9 345 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 MORF4L1Q9UBU8 362 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 TMX2Q9Y320 296 aa14.09□□□□□ -0.15
ERBB3-216ENST00000550869 A0A1W2PPC1 479 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 PALM3A6NDB9 673 aaPredicted RBP14.08□□□□□ -0.16
ERBB3-216ENST00000550869 DDIT3P35638 169 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 METAP2P50579 478 aaKnown RBP eCLIP14.08□□□□□ -0.16
ERBB3-216ENST00000550869 IRX3P78415 501 aaPredicted RBP14.08□□□□□ -0.16
ERBB3-216ENST00000550869 FUT2Q10981 343 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 STK3Q13188 491 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 MTMR2Q13614 643 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 GRM4Q14833 912 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 RAB3GAP1Q15042 981 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 MICU3Q86XE3 530 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 CCDC83Q8IWF9 413 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 GMCL1P1Q8NEA9 526 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 PLXNB2O15031 1838 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 LAMA3Q16787 3333 aa14.08□□□□□ -0.16
ERBB3-216ENST00000550869 CCDC196A0A1B0GTZ2 297 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 GOLGA8AA7E2F4 631 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 USP17L10C9JJH3 530 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 EVI5O60447 810 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 PDHBP11177 359 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 RXRAP19793 462 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 ADD1P35611 737 aaKnown RBP14.07□□□□□ -0.16
ERBB3-216ENST00000550869 CCT2P78371 535 aaKnown RBP14.07□□□□□ -0.16
ERBB3-216ENST00000550869 RTN1Q16799 776 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms