RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 UBE3CQ15386 1083 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 LRRC47Q8N1G4 583 aaKnown RBP9.6□□□□□ -0.87
PFDN5-211ENST00000550846 DDX11Q96FC9 970 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 LRRCC1Q9C099 1032 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 MKNK2Q9HBH9 465 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 RAVER2Q9HCJ3 691 aaKnown RBP9.6□□□□□ -0.87
PFDN5-211ENST00000550846 TMEM39AQ9NV64 488 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 CLIP2Q9UDT6 1046 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 ADAMTS5Q9UNA0 930 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 CDH23Q9H251 3354 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 VCANP13611 3396 aa9.6□□□□□ -0.87
PFDN5-211ENST00000550846 PARP14Q460N5 1801 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 F5H6K3 240 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 ADCY6O43306 1168 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 ADAMTS4O75173 837 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 SNAI1O95863 264 aaPredicted RBP9.59□□□□□ -0.87
PFDN5-211ENST00000550846 APPP05067 770 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 MS4A1P11836 297 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 TDO2P48775 406 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 ACLYP53396 1101 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 FPGSQ05932 587 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 KLRC3Q07444 240 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 KCNA10Q16322 511 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 ZSCAN25Q6NSZ9 544 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 OSBP2Q969R2 916 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 VTI1AQ96AJ9 217 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 STRBPQ96SI9 672 aaKnown RBP9.59□□□□□ -0.87
PFDN5-211ENST00000550846 TEX13BQ9BXU2 312 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 EPB41L4AQ9HCS5 686 aaPredicted RBP9.59□□□□□ -0.87
PFDN5-211ENST00000550846 STARD7Q9NQZ5 370 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 ARPP21Q9UBL0 812 aaPredicted RBP9.59□□□□□ -0.87
PFDN5-211ENST00000550846 TACC3Q9Y6A5 838 aa9.59□□□□□ -0.87
PFDN5-211ENST00000550846 DDX49Q9Y6V7 483 aaKnown RBP9.59□□□□□ -0.87
PFDN5-211ENST00000550846 GSG1L2A8MUP6 293 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 M0R2C6 588 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 C6orf222P0C671 652 aaPredicted RBP9.58□□□□□ -0.88
PFDN5-211ENST00000550846 PTGS1P23219 599 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 SMAD3P84022 425 aaKnown RBP9.58□□□□□ -0.88
PFDN5-211ENST00000550846 FAAP100Q0VG06 881 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 IKQ13123 557 aaPredicted RBP9.58□□□□□ -0.88
PFDN5-211ENST00000550846 C1orf53Q5VUE5 145 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 ANKRD35Q8N283 1001 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 PPM1EQ8WY54 764 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 PPP1R12CQ9BZL4 782 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 ECHDC1Q9NTX5 307 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 NRBP1Q9UHY1 535 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 FAM184BQ9ULE4 1060 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
PFDN5-211ENST00000550846 PLXNA1Q9UIW2 1896 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 SMCHD1A6NHR9 2005 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 GRXCR1A8MXD5 290 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 DCDC2CA8MYV0 355 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 KIAA0355O15063 1070 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 GPAA1O43292 621 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 ZBED4O75132 1171 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 ACRP10323 421 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 DNAJB2P25686 324 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 COPB2P35606 906 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 SNAP25P60880 206 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 BEX3Q00994 111 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 CNTN2Q02246 1040 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 GRIN2CQ14957 1233 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 NOL8Q76FK4 1167 aaKnown RBP9.57□□□□□ -0.88
PFDN5-211ENST00000550846 PRPF38AQ8NAV1 312 aaKnown RBP9.57□□□□□ -0.88
PFDN5-211ENST00000550846 CEP95Q96GE4 821 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 SEC62Q99442 399 aaKnown RBP9.57□□□□□ -0.88
PFDN5-211ENST00000550846 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.57□□□□□ -0.881e-23■■■□□ 18.7
PFDN5-211ENST00000550846 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.57□□□□□ -0.88
PFDN5-211ENST00000550846 RCAN3Q9UKA8 241 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 MTMR7Q9Y216 660 aa9.57□□□□□ -0.88
PFDN5-211ENST00000550846 DIS3Q9Y2L1 958 aaKnown RBP9.57□□□□□ -0.88
PFDN5-211ENST00000550846 SPTBN5Q9NRC6 3674 aaKnown RBP9.57□□□□□ -0.88
PFDN5-211ENST00000550846 MYH7P12883 1935 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 ZNFX1Q9P2E3 1918 aaKnown RBP9.56□□□□□ -0.88
PFDN5-211ENST00000550846 PRUNE2Q8WUY3 3088 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 ROBO3Q96MS0 1386 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.56□□□□□ -0.88
PFDN5-211ENST00000550846 RNF113AO15541 343 aaKnown RBP9.56□□□□□ -0.88
PFDN5-211ENST00000550846 ASGR1P07306 291 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 PBX2P40425 430 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 ACVR2BQ13705 512 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 CCDC144BQ3MJ40 725 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 SBK1Q52WX2 424 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 CCDC129Q6ZRS4 1044 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 ARMCX2Q7L311 632 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 RASGRP2Q7LDG7 609 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 CCDC144CPQ8IYA2 1237 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 ZNF444Q8N0Y2 327 aaPredicted RBP9.56□□□□□ -0.88
PFDN5-211ENST00000550846 KBTBD3Q8NAB2 608 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 USP38Q8NB14 1042 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 NUP133Q8WUM0 1156 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 APPBP2Q92624 585 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 FGD4Q96M96 766 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 GLT1D1Q96MS3 346 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 PRDM6Q9NQX0 595 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 NYAP2Q9P242 653 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 SYNGAP1Q96PV0 1343 aa9.56□□□□□ -0.88
PFDN5-211ENST00000550846 GREB1LQ9C091 1923 aaPredicted RBP9.55□□□□□ -0.88
PFDN5-211ENST00000550846 DNAJC25-GNG10A0A024R161 153 aa9.55□□□□□ -0.88
PFDN5-211ENST00000550846 IGKV6D-41A0A0C4DH26 115 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms