RNA–Protein interactions for RNA: ENST00000550455.5

CCT2-209, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-209ENST00000550455 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
CCT2-209ENST00000550455 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 F5H6K3 240 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 PGK1P00558 417 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 PGK2P07205 417 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 GNAT2P19087 354 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 NKX3-2P78367 333 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 KLRC3Q07444 240 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 FAAP100Q0VG06 881 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 FAM83BQ5T0W9 1011 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 CCSAPQ6IQ19 270 aaPredicted RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 PCSK9Q8NBP7 692 aaKnown RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 MKL1Q969V6 931 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 DDX11Q96FC9 970 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 RNPC3Q96LT9 517 aaKnown RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 STRBPQ96SI9 672 aaKnown RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCT2-209ENST00000550455 SEZ6LQ9BYH1 1024 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 LRRCC1Q9C099 1032 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 ABHD16BQ9H3Z7 469 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 STARD7Q9NQZ5 370 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 TMEM39AQ9NV64 488 aa12.35□□□□□ -0.43
CCT2-209ENST00000550455 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
CCT2-209ENST00000550455 PLXNA1Q9UIW2 1896 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 CYP2D7A0A087X1C5 515 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 APBB1O00213 710 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 ZBED4O75132 1171 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 TIMP1P01033 207 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 ZFYP08048 801 aaPredicted RBP12.34□□□□□ -0.43
CCT2-209ENST00000550455 TAL1P17542 331 aaPredicted RBP12.34□□□□□ -0.43
CCT2-209ENST00000550455 RASA1P20936 1047 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 ITGB8P26012 769 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 SNRNP48Q6IEG0 339 aaKnown RBP12.34□□□□□ -0.43
CCT2-209ENST00000550455 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 GLT1D1Q96MS3 346 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 MKNK2Q9HBH9 465 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 SPC25Q9HBM1 224 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 BAZ2AQ9UIF9 1905 aaKnown RBP12.34□□□□□ -0.43
CCT2-209ENST00000550455 COL11A1P12107 1806 aaPredicted RBP12.34□□□□□ -0.43
CCT2-209ENST00000550455 SYNRGQ9UMZ2 1314 aa12.34□□□□□ -0.43
CCT2-209ENST00000550455 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.43
CCT2-209ENST00000550455 IGKV6D-41A0A0C4DH26 115 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 GSG1L2A8MUP6 293 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 PQBP1O60828 265 aaKnown RBP12.33□□□□□ -0.44
CCT2-209ENST00000550455 SNAI1O95863 264 aaPredicted RBP12.33□□□□□ -0.44
CCT2-209ENST00000550455 FOSL2P15408 326 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 CDK7P50613 346 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 GJA9P57773 515 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
CCT2-209ENST00000550455 MFSD5Q6N075 450 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 GMCL1P1Q8NEA9 526 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 UPF3AQ9H1J1 476 aaKnown RBP12.33□□□□□ -0.44
CCT2-209ENST00000550455 SLC38A10Q9HBR0 1119 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 TBX21Q9UL17 535 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 COG6Q9Y2V7 657 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 MYH7P12883 1935 aa12.33□□□□□ -0.44
CCT2-209ENST00000550455 SMIM22K7EJ46 135 aa12.32□□□□□ -0.44
CCT2-209ENST00000550455 NDUFB10O96000 172 aa12.32□□□□□ -0.44
CCT2-209ENST00000550455 PPIGQ13427 754 aaKnown RBP eCLIP12.32□□□□□ -0.445e-7■□□□□ 9.6
CCT2-209ENST00000550455 ACVR2BQ13705 512 aa12.32□□□□□ -0.44
CCT2-209ENST00000550455 KCNA10Q16322 511 aa12.32□□□□□ -0.44
CCT2-209ENST00000550455 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
CCT2-209ENST00000550455 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
CCT2-209ENST00000550455 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
CCT2-209ENST00000550455 ZNF444Q8N0Y2 327 aaPredicted RBP12.32□□□□□ -0.44
CCT2-209ENST00000550455 MYLIPQ8WY64 445 aa12.32□□□□□ -0.44
CCT2-209ENST00000550455 APPBP2Q92624 585 aa12.32□□□□□ -0.44
CCT2-209ENST00000550455 GPATCH3Q96I76 525 aa12.32□□□□□ -0.44
CCT2-209ENST00000550455 CTDP1Q9Y5B0 961 aaPredicted RBP12.32□□□□□ -0.44
CCT2-209ENST00000550455 A0A0U1RQG5 324 aaPredicted RBP12.31□□□□□ -0.44
CCT2-209ENST00000550455 RAD21O60216 631 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 PLA2G6O60733 806 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 TTLL1O95922 423 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 DNAJB2P25686 324 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 EPHB4P54760 987 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 RASIP1Q5U651 963 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.31□□□□□ -0.44
CCT2-209ENST00000550455 MTMR4Q9NYA4 1195 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 CLIP2Q9UDT6 1046 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
CCT2-209ENST00000550455 RIPK3Q9Y572 518 aa12.31□□□□□ -0.44
CCT2-209ENST00000550455 PLIN4Q96Q06 1357 aa12.3□□□□□ -0.44
CCT2-209ENST00000550455 ARVCFO00192 962 aa12.3□□□□□ -0.44
CCT2-209ENST00000550455 TLR3O15455 904 aaKnown RBP12.3□□□□□ -0.44
CCT2-209ENST00000550455 RNF113AO15541 343 aaKnown RBP12.3□□□□□ -0.44
CCT2-209ENST00000550455 CABYRO75952 493 aa12.3□□□□□ -0.44
CCT2-209ENST00000550455 ASGR1P07306 291 aa12.3□□□□□ -0.44
CCT2-209ENST00000550455 C6orf222P0C671 652 aaPredicted RBP12.3□□□□□ -0.44
CCT2-209ENST00000550455 TKFCQ3LXA3 575 aa12.3□□□□□ -0.44
CCT2-209ENST00000550455 CCDC144BQ3MJ40 725 aa12.3□□□□□ -0.44
CCT2-209ENST00000550455 PSRC1Q6PGN9 363 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms