RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 USP17L4A6NCW7 530 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 FAM205CA6NFA0 338 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 FOXN1O15353 648 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 OR52Z1P0C646 297 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 BMP6P22004 513 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 RHBDL3P58872 404 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 FKBP1AP62942 108 aaKnown RBP10.11□□□□□ -0.79
TMEM116-209ENST00000550020 GTF2IP78347 998 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 PAK1Q13153 545 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 KCNB1Q14721 858 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 E2F4Q16254 413 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 TMEM266Q2M3C6 531 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 EARS2Q5JPH6 523 aaKnown RBP10.11□□□□□ -0.79
TMEM116-209ENST00000550020 RRAGBQ5VZM2 374 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 PDXDC2PQ6P474 469 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 DPP8Q6V1X1 898 aaPredicted RBP10.11□□□□□ -0.79
TMEM116-209ENST00000550020 USP17L1Q7RTZ2 530 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 NEK8Q86SG6 692 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 HOMER1Q86YM7 354 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 ZNF592Q92610 1267 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 TEKT1Q969V4 418 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 SHISA4Q96DD7 197 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 PANX2Q96RD6 677 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 BAG1Q99933 345 aaPredicted RBP10.11□□□□□ -0.79
TMEM116-209ENST00000550020 MRIQ9BWK5 157 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 SRRTQ9BXP5 876 aaKnown RBP10.11□□□□□ -0.79
TMEM116-209ENST00000550020 TMX1Q9H3N1 280 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 POLLQ9UGP5 575 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 DAGLAQ9Y4D2 1042 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 PARP3Q9Y6F1 533 aa10.11□□□□□ -0.79
TMEM116-209ENST00000550020 BAZ2AQ9UIF9 1905 aaKnown RBP10.11□□□□□ -0.79
TMEM116-209ENST00000550020 TAF1P21675 1872 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 ITIH6Q6UXX5 1313 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 PHLPP2Q6ZVD8 1323 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 SMCO2A6NFE2 343 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 AKR1B15C9JRZ8 316 aaPredicted RBP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 H7C1D1 291 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 M0R2N6 131 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 PSMA7O14818 248 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 PLSCR1O15162 318 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 TRIM37O94972 964 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 TTLL1O95922 423 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 RPN1P04843 607 aaKnown RBP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 HSPA1LP34931 641 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 RBM10P98175 930 aaKnown RBP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 HDLBPQ00341 1268 aaKnown RBP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 DDR1Q08345 913 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 TBX2Q13207 712 aaPredicted RBP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 CUL4BQ13620 913 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 ARID5BQ14865 1188 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 GPATCH4Q5T3I0 446 aaKnown RBP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 CDKAL1Q5VV42 579 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 USP49Q70CQ1 688 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 PODNQ7Z5L7 613 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 CNGA4Q8IV77 575 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 REXO1Q8N1G1 1221 aaKnown RBP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 STAG2Q8N3U4 1231 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 C4orf32Q8N8J7 132 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 GPKOWQ92917 476 aaPredicted RBP eCLIP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 CALML4Q96GE6 196 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 MASTLQ96GX5 879 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 ERO1AQ96HE7 468 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 PPP1R13BQ96KQ4 1090 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 EHD4Q9H223 541 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 DHX36Q9H2U1 1008 aaKnown RBP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 DISC1Q9NRI5 854 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 CGNQ9P2M7 1197 aaKnown RBP10.1□□□□□ -0.79
TMEM116-209ENST00000550020 SERPINB13Q9UIV8 391 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 UBR3Q6ZT12 1888 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 LRRC37AA6NMS7 1700 aa10.1□□□□□ -0.79
TMEM116-209ENST00000550020 BICDL2A1A5D9 508 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 PPP1R3GB7ZBB8 358 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 SLC26A4O43511 780 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 SRGNP10124 158 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 ADCY7P51828 1080 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 FMR1Q06787 632 aaKnown RBP eCLIP10.09□□□□□ -0.79
TMEM116-209ENST00000550020 NR1I3Q14994 352 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 SLC4A8Q2Y0W8 1093 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 GRIPAP1Q4V328 841 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 E4F1Q66K89 784 aaPredicted RBP10.09□□□□□ -0.79
TMEM116-209ENST00000550020 FAM114A1Q8IWE2 563 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 GRAMD1CQ8IYS0 662 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 TRIM34Q9BYJ4 488 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 RIOX1Q9H6W3 641 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 USP40Q9NVE5 1235 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 TRMT1Q9NXH9 659 aaKnown RBP10.09□□□□□ -0.79
TMEM116-209ENST00000550020 MTMR4Q9NYA4 1195 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 MAGEC2Q9UBF1 373 aaPredicted RBP10.09□□□□□ -0.79
TMEM116-209ENST00000550020 LIMA1Q9UHB6 759 aaKnown RBP10.09□□□□□ -0.79
TMEM116-209ENST00000550020 TTF2Q9UNY4 1162 aaKnown RBP10.09□□□□□ -0.79
TMEM116-209ENST00000550020 MYH6P13533 1939 aa10.09□□□□□ -0.79
TMEM116-209ENST00000550020 SNED1Q8TER0 1413 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 MYH2Q9UKX2 1941 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 A0A087X0B3 334 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 LRRC10BA6NIK2 292 aa10.08□□□□□ -0.8
TMEM116-209ENST00000550020 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
TMEM116-209ENST00000550020 SLU7O95391 586 aaKnown RBP10.08□□□□□ -0.8
TMEM116-209ENST00000550020 GCFC2P16383 781 aaKnown RBP10.08□□□□□ -0.8
TMEM116-209ENST00000550020 EEF1GP26641 437 aaKnown RBP10.08□□□□□ -0.8
TMEM116-209ENST00000550020 MRPL12P52815 198 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms