RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 NUP62CLQ9H1M0 184 aa14.39□□□□□ -0.11
CACNB3-212ENST00000549971 PNMA2Q9UL42 364 aa14.39□□□□□ -0.11
CACNB3-212ENST00000549971 PCDHA7Q9UN72 937 aa14.39□□□□□ -0.11
CACNB3-212ENST00000549971 CLIC4Q9Y696 253 aa14.39□□□□□ -0.11
CACNB3-212ENST00000549971 FRMPD2Q68DX3 1309 aaPredicted RBP14.39□□□□□ -0.11
CACNB3-212ENST00000549971 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 LAD1O00515 517 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 CMA1P23946 247 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 MRE11P49959 708 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 CEBPZQ03701 1054 aaKnown RBP14.38□□□□□ -0.11
CACNB3-212ENST00000549971 NR5A1Q13285 461 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 LRSAM1Q6UWE0 723 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 SIAH1Q8IUQ4 282 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 ADGRF4Q8IZF3 695 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 KRI1Q8N9T8 703 aaKnown RBP14.38□□□□□ -0.11
CACNB3-212ENST00000549971 CHURC1Q8WUH1 139 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 FERMT2Q96AC1 680 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 L3MBTL3Q96JM7 780 aaPredicted RBP14.38□□□□□ -0.11
CACNB3-212ENST00000549971 PIGSQ96S52 555 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 NAP1L4Q99733 375 aaKnown RBP14.38□□□□□ -0.11
CACNB3-212ENST00000549971 VCPKMTQ9H867 229 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 AS3MTQ9HBK9 375 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 GPCPD1Q9NPB8 672 aa14.38□□□□□ -0.11
CACNB3-212ENST00000549971 TCHHQ07283 1943 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 MYH4Q9Y623 1939 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 FAM237AA0A1B0GTK4 181 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 hCG_1642624A0A1W2PR95 340 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 SHTN1A0MZ66 631 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 PHF20L1A8MW92 1017 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 M0R2N6 131 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 KINO60870 393 aaKnown RBP14.37□□□□□ -0.11
CACNB3-212ENST00000549971 ADCY7P51828 1080 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 MRPL12P52815 198 aaKnown RBP14.37□□□□□ -0.11
CACNB3-212ENST00000549971 USP14P54578 494 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 SLC35G1Q2M3R5 365 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 TTC38Q5R3I4 469 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 ANGEL2Q5VTE6 544 aaKnown RBP14.37□□□□□ -0.11
CACNB3-212ENST00000549971 C9orf131Q5VYM1 1079 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 CLEC10AQ8IUN9 316 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 CCAR1Q8IX12 1150 aaKnown RBP14.37□□□□□ -0.11
CACNB3-212ENST00000549971 OXER1Q8TDS5 423 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 GPKOWQ92917 476 aaPredicted RBP eCLIP14.37□□□□□ -0.11
CACNB3-212ENST00000549971 CCDC34Q96HJ3 373 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 PYM1Q9BRP8 204 aaKnown RBP14.37□□□□□ -0.11
CACNB3-212ENST00000549971 CLSTN2Q9H4D0 955 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 JMJD4Q9H9V9 463 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 ZNF112Q9UJU3 913 aa14.37□□□□□ -0.11
CACNB3-212ENST00000549971 SBF1O95248 1867 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 SMCO2A6NFE2 343 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 EGFRP00533 1210 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 YBX3P16989 372 aaKnown RBP eCLIP14.36□□□□□ -0.11
CACNB3-212ENST00000549971 STAT2P52630 851 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 NONOQ15233 471 aaKnown RBP eCLIP14.36□□□□□ -0.11
CACNB3-212ENST00000549971 MAP3K11Q16584 847 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 SYDE2Q5VT97 1194 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 ARL6IP4Q66PJ3 421 aaKnown RBP14.36□□□□□ -0.11
CACNB3-212ENST00000549971 REXO1Q8N1G1 1221 aaKnown RBP14.36□□□□□ -0.11
CACNB3-212ENST00000549971 ZC3H15Q8WU90 426 aaKnown RBP14.36□□□□□ -0.11
CACNB3-212ENST00000549971 SHISA4Q96DD7 197 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 TIGD1Q96MW7 591 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 FTOQ9C0B1 505 aaKnown RBP eCLIP14.36□□□□□ -0.11
CACNB3-212ENST00000549971 UBA5Q9GZZ9 404 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 DACT1Q9NYF0 836 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 FAM13BQ9NYF5 915 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 GGA3Q9NZ52 723 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 FEM1BQ9UK73 627 aa14.36□□□□□ -0.11
CACNB3-212ENST00000549971 SRPRBQ9Y5M8 271 aaKnown RBP14.36□□□□□ -0.11
CACNB3-212ENST00000549971 WDR46O15213 610 aaKnown RBP14.35□□□□□ -0.11
CACNB3-212ENST00000549971 CAVIN2O95810 425 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 FDX1P10109 184 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 PTPREP23469 700 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 TOB1P50616 345 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-212ENST00000549971 RRP1BQ14684 758 aaKnown RBP14.35□□□□□ -0.11
CACNB3-212ENST00000549971 AXDND1Q5T1B0 1012 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-212ENST00000549971 RBM43Q6ZSC3 357 aaKnown RBP14.35□□□□□ -0.11
CACNB3-212ENST00000549971 PIK3AP1Q6ZUJ8 805 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 USP50Q70EL3 339 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-212ENST00000549971 KCTD1Q719H9 257 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 MIGA2Q7L4E1 593 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 ELOA2Q8IYF1 753 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-212ENST00000549971 SCYL3Q8IZE3 742 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 FSIP1Q8NA03 581 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 TRPM4Q8TD43 1214 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 CUL5Q93034 780 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 DCPSQ96C86 337 aaKnown RBP14.35□□□□□ -0.11
CACNB3-212ENST00000549971 WDR18Q9BV38 432 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 VAT1LQ9HCJ6 419 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 RIC8AQ9NPQ8 531 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 PCDHA6Q9UN73 950 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 PCDHA8Q9Y5H6 950 aa14.35□□□□□ -0.11
CACNB3-212ENST00000549971 A0A1W2PRG0 241 aa14.34□□□□□ -0.11
CACNB3-212ENST00000549971 SYCE3A1L190 88 aa14.34□□□□□ -0.11
CACNB3-212ENST00000549971 IQCA1LA6NCM1 817 aa14.34□□□□□ -0.11
CACNB3-212ENST00000549971 RAD21O60216 631 aa14.34□□□□□ -0.11
CACNB3-212ENST00000549971 LIG1P18858 919 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms