RNA–Protein interactions for RNA: ENST00000549633.5

SLC38A1-207, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best)

Gene SLC38A1, Length 1,076 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-207ENST00000549633 HSP90AB4PQ58FF6 505 aa25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 CCSAPQ6IQ19 270 aaPredicted RBP25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 TIFAQ96CG3 184 aa25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 TOX2Q96NM4 488 aa25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 KANSL2Q9H9L4 492 aa25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 GOPCQ9HD26 462 aa25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 TBX21Q9UL17 535 aa25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 RIPK3Q9Y572 518 aa25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 MCM3APO60318 1980 aa25.2■■□□□ 1.62
SLC38A1-207ENST00000549633 ADCY6O43306 1168 aa25.19■■□□□ 1.62
SLC38A1-207ENST00000549633 TIMP1P01033 207 aa25.19■■□□□ 1.62
SLC38A1-207ENST00000549633 TJAP1Q5JTD0 557 aa25.19■■□□□ 1.62
SLC38A1-207ENST00000549633 C16orf59Q7L2K0 433 aa25.19■■□□□ 1.62
SLC38A1-207ENST00000549633 STK11IPQ8N1F8 1099 aa25.19■■□□□ 1.62
SLC38A1-207ENST00000549633 NUP133Q8WUM0 1156 aa25.19■■□□□ 1.62
SLC38A1-207ENST00000549633 FAM184BQ9ULE4 1060 aa25.19■■□□□ 1.62
SLC38A1-207ENST00000549633 SNRNP48Q6IEG0 339 aaKnown RBP25.18■■□□□ 1.62
SLC38A1-207ENST00000549633 CTR9Q6PD62 1173 aa25.18■■□□□ 1.62
SLC38A1-207ENST00000549633 KIF1BPQ96EK5 621 aa25.18■■□□□ 1.62
SLC38A1-207ENST00000549633 SLC4A4Q9Y6R1 1079 aa25.18■■□□□ 1.62
SLC38A1-207ENST00000549633 MOXD2PA6NHM9 499 aa25.17■■□□□ 1.62
SLC38A1-207ENST00000549633 AMOTL1Q8IY63 956 aa25.17■■□□□ 1.62
SLC38A1-207ENST00000549633 DDX11Q96FC9 970 aa25.17■■□□□ 1.62
SLC38A1-207ENST00000549633 SLF1Q9BQI6 1058 aa25.17■■□□□ 1.62
SLC38A1-207ENST00000549633 ZBED9Q6R2W3 1325 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 C6orf222P0C671 652 aaPredicted RBP25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 ACRP10323 421 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 COPB2P35606 906 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 TMEM240Q5SV17 173 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 MFSD5Q6N075 450 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 CPXCR1Q8N123 301 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 GBF1Q92538 1859 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 TEX13BQ9BXU2 312 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 PBX4Q9BYU1 374 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 PRDM12Q9H4Q4 367 aa25.16■■□□□ 1.62
SLC38A1-207ENST00000549633 MUC3AQ02505 3323 aa25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 SYNGAP1Q96PV0 1343 aa25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 DNAJC25-GNG10A0A024R161 153 aa25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 ASGR1P07306 291 aa25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 CSF2RAP15509 400 aa25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 CCDC129Q6ZRS4 1044 aa25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 SIRT2Q8IXJ6 389 aa25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 PPP1R12CQ9BZL4 782 aa25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 PUS7LQ9H0K6 701 aaKnown RBP25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 TTC28Q96AY4 2481 aa25.15■■□□□ 1.62
SLC38A1-207ENST00000549633 MYH4Q9Y623 1939 aa25.14■■□□□ 1.62
SLC38A1-207ENST00000549633 TNFRSF10AO00220 468 aa25.14■■□□□ 1.62
SLC38A1-207ENST00000549633 DUSP11O75319 330 aaKnown RBP25.14■■□□□ 1.62
SLC38A1-207ENST00000549633 CDK7P50613 346 aa25.14■■□□□ 1.62
SLC38A1-207ENST00000549633 MAMDC4Q6UXC1 1216 aa25.14■■□□□ 1.62
SLC38A1-207ENST00000549633 VTI1AQ96AJ9 217 aa25.14■■□□□ 1.62
SLC38A1-207ENST00000549633 FGD4Q96M96 766 aa25.14■■□□□ 1.62
SLC38A1-207ENST00000549633 GLT1D1Q96MS3 346 aa25.14■■□□□ 1.62
SLC38A1-207ENST00000549633 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.14■■□□□ 1.626e-7■□□□□ 10.9
SLC38A1-207ENST00000549633 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.14■■□□□ 1.62
SLC38A1-207ENST00000549633 PPIGQ13427 754 aaKnown RBP eCLIP25.13■■□□□ 1.612e-7■□□□□ 11.3
SLC38A1-207ENST00000549633 ACVR2BQ13705 512 aa25.13■■□□□ 1.61
SLC38A1-207ENST00000549633 ZNF365Q70YC5 407 aa25.13■■□□□ 1.61
SLC38A1-207ENST00000549633 MSL3Q8N5Y2 521 aaKnown RBP25.13■■□□□ 1.61
SLC38A1-207ENST00000549633 DDRGK1Q96HY6 314 aa25.13■■□□□ 1.61
SLC38A1-207ENST00000549633 RAVER2Q9HCJ3 691 aaKnown RBP25.13■■□□□ 1.61
SLC38A1-207ENST00000549633 RAPGEFL1Q9UHV5 662 aa25.13■■□□□ 1.61
SLC38A1-207ENST00000549633 F5H6K3 240 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 NDUFB10O96000 172 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 ATP5JP18859 108 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 COL9A1P20849 921 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 RASA1P20936 1047 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 CST5P28325 142 aaPredicted RBP25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 KLRC3Q07444 240 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 UBE3CQ15386 1083 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 CCDC144BQ3MJ40 725 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 RASIP1Q5U651 963 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 GAS2L1Q99501 681 aaPredicted RBP25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 HAUS7Q99871 368 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 ELP1O95163 1332 aa25.12■■□□□ 1.61
SLC38A1-207ENST00000549633 KIFC2Q96AC6 838 aa25.11■■□□□ 1.61
SLC38A1-207ENST00000549633 MROH7Q68CQ1 1323 aa25.11■■□□□ 1.61
SLC38A1-207ENST00000549633 ARVCFO00192 962 aa25.1■■□□□ 1.61
SLC38A1-207ENST00000549633 HNRNPUQ00839 825 aaKnown RBP eCLIP25.1■■□□□ 1.61
SLC38A1-207ENST00000549633 ADGRE1Q14246 886 aa25.1■■□□□ 1.61
SLC38A1-207ENST00000549633 CCDC85BQ15834 202 aaPredicted RBP25.1■■□□□ 1.61
SLC38A1-207ENST00000549633 FAM126BQ8IXS8 530 aa25.1■■□□□ 1.61
SLC38A1-207ENST00000549633 UPF3AQ9H1J1 476 aaKnown RBP25.1■■□□□ 1.61
SLC38A1-207ENST00000549633 ARPP21Q9UBL0 812 aaPredicted RBP25.1■■□□□ 1.61
SLC38A1-207ENST00000549633 A0A0U1RQG5 324 aaPredicted RBP25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 CTAGE5O15320 804 aa25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 CYP2C18P33260 490 aa25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 GJA9P57773 515 aa25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 BEX3Q00994 111 aa25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 GNASQ5JWF2 1037 aa25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 ZNF467Q7Z7K2 595 aaPredicted RBP25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 ANKRD35Q8N283 1001 aa25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 TMEM199Q8N511 208 aa25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 PRPF38AQ8NAV1 312 aaKnown RBP25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 PCSK9Q8NBP7 692 aaKnown RBP25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 CXXC1Q9P0U4 656 aaPredicted RBP25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 NYAP2Q9P242 653 aa25.09■■□□□ 1.61
SLC38A1-207ENST00000549633 ZBED4O75132 1171 aa25.08■■□□□ 1.61
SLC38A1-207ENST00000549633 PTGS1P23219 599 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms